get-CVN-data #303

	name: "get-CVN-data"
	on:
	workflow_dispatch:
	schedule:
	- cron: "0 8,16 * * 1,5"


	jobs:
	get-cvn-data:
	runs-on: ubuntu-latest
	steps:
	- uses: actions/checkout@main

	- name: Setup Python
	uses: actions/setup-python@v4
	with:
	python-version: '3.x'

	- name: Install requirements
	run: \|
	pip install pandas requests pathlib pyzipper epiweeks

	- name: Get data
	env:
	CVN_USER: ${{ secrets.CVN_USER }}
	CVN_PASSWORD: ${{ secrets.CVN_PASSWORD }}
	CVN_URL: ${{ secrets.CVN_URL }}

	run: \|
	cd ./code
	python3 ./get_cvn.py

	- name: Commit files
	env:
	AUTH: ${{ secrets.GITHUB_TOKEN }}
	run: \|
	git config --local user.email "[email protected]"
	git config --local user.name "GitHub Action"
	git remote rm origin
	git remote add origin https://${AUTH}@github.com/KITmetricslab/RESPINOW-Data.git > /dev/null 2>&1
	git pull origin main
	git add --all data/CVN/
	git commit --allow-empty -m "Update CVN data"

	- name: Push changes
	run: \|
	git push --quiet --set-upstream origin HEAD:main
	echo "pushed to github"

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