codespell: config, workflow and some typos fixed (#120) #121
Annotations
2 errors and 5 warnings
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docs/src/tutorial.md#L170
doctest failure in src/tutorial.md:170-184
```jldoctest compress
julia> using Zarr
julia> compressor = Zarr.BloscCompressor(cname="zstd", clevel=3, shuffle=true)
Zarr.BloscCompressor(0, 3, "zstd", true)
julia> data = Int32(1):Int32(100000000)
1:100000000
julia> z = Zarr.zcreate(Int32,10000, 10000, chunks = (1000,1000),compressor=compressor)
ZArray{Int32} of size 10000 x 10000
julia> z[:,:]=data
1:100000000
```
Subexpression:
compressor = Zarr.BloscCompressor(cname="zstd", clevel=3, shuffle=true)
Evaluated output:
Zarr.BloscCompressor(0, 3, "zstd", 1)
Expected output:
Zarr.BloscCompressor(0, 3, "zstd", true)
diff =
Warning: Diff output requires color.
Zarr.BloscCompressor(0, 3, "zstd", true)1)
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docs/src/tutorial.md#L190
doctest failure in src/tutorial.md:190-205
```jldoctest compress
julia> zinfo(z)
Type : ZArray
Data type : Int32
Shape : (10000, 10000)
Chunk Shape : (1000, 1000)
Order : C
Read-Only : false
Compressor : Zarr.BloscCompressor(0, 3, "zstd", true)
Filters : nothing
Store type : Dictionary Storage
No. bytes : 400000000
No. bytes stored : 2412289
Storage ratio : 165.81761140559857
Chunks initialized : 100/100
```
Subexpression:
zinfo(z)
Evaluated output:
Type : ZArray
Data type : Int32
Shape : (10000, 10000)
Chunk Shape : (1000, 1000)
Order : C
Read-Only : false
Compressor : Zarr.BloscCompressor(0, 3, "zstd", 1)
Filters : nothing
Store type : Dictionary Storage
No. bytes : 400000000
No. bytes stored : 2412289
Storage ratio : 165.81761140559857
Chunks initialized : 100/100
Expected output:
Type : ZArray
Data type : Int32
Shape : (10000, 10000)
Chunk Shape : (1000, 1000)
Order : C
Read-Only : false
Compressor : Zarr.BloscCompressor(0, 3, "zstd", true)
Filters : nothing
Store type : Dictionary Storage
No. bytes : 400000000
No. bytes stored : 2412289
Storage ratio : 165.81761140559857
Chunks initialized : 100/100
diff =
Warning: Diff output requires color.
Type : ZArray
Data type : Int32
Shape : (10000, 10000)
Chunk Shape : (1000, 1000)
Order : C
Read-Only : false
Compressor : Zarr.BloscCompressor(0, 3, "zstd", true)
1)
Filters : nothing
Store type : Dictionary Storage
No. bytes : 400000000
No. bytes stored : 2412289
Storage ratio : 165.81761140559857
Chunks initialized : 100/100
|
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../../../.julia/packages/Documenter/bYYzK/src/Utilities/Utilities.jl#L34
no docs found for 'zname' in `@docs` block in src/storage.md:9-18
```@docs
storagesize
zname
Base.getindex(d::AbstractStore,i::String)
Base.setindex!(d::AbstractStore,v,i::String)
subdirs
Base.keys(d::AbstractStore)
newsub
getsub
```
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../../../.julia/packages/Documenter/bYYzK/src/Utilities/Utilities.jl#L34
no docs found for 'Base.keys(d::AbstractStore)' in `@docs` block in src/storage.md:9-18
```@docs
storagesize
zname
Base.getindex(d::AbstractStore,i::String)
Base.setindex!(d::AbstractStore,v,i::String)
subdirs
Base.keys(d::AbstractStore)
newsub
getsub
```
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../../../.julia/packages/Documenter/bYYzK/src/Utilities/Utilities.jl#L34
undefined binding 'Zarr.newsub' in `@docs` block in src/storage.md:9-18
```@docs
storagesize
zname
Base.getindex(d::AbstractStore,i::String)
Base.setindex!(d::AbstractStore,v,i::String)
subdirs
Base.keys(d::AbstractStore)
newsub
getsub
```
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../../../.julia/packages/Documenter/bYYzK/src/Utilities/Utilities.jl#L34
undefined binding 'Zarr.getsub' in `@docs` block in src/storage.md:9-18
```@docs
storagesize
zname
Base.getindex(d::AbstractStore,i::String)
Base.setindex!(d::AbstractStore,v,i::String)
subdirs
Base.keys(d::AbstractStore)
newsub
getsub
```
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../../../.julia/packages/Documenter/bYYzK/src/Utilities/Utilities.jl#L34
25 docstrings not included in the manual:
Zarr.zgroup :: Tuple{ZGroup, Any}
Zarr.zgroup :: Union{Tuple{Zarr.AbstractStore}, Tuple{Zarr.AbstractStore, String}}
Zarr.ZlibCompressor
Zarr.VLenArrayFilter
Zarr.VLenUTF8Filter
Zarr.normalize_path :: Tuple{AbstractString}
Zarr.trans_ind :: Tuple{AbstractUnitRange, Any}
Zarr.zopen :: Union{Tuple{String}, Tuple{String, Any}}
Zarr.zopen :: Union{Tuple{Zarr.AbstractStore}, Tuple{Zarr.AbstractStore, Any}}
Base.append! :: Union{Tuple{N}, Tuple{ZArray{<:Any, N}, Any}} where N
Zarr.concurrent_io_tasks
Zarr.Metadata
Zarr.Metadata :: Union{Tuple{C}, Tuple{N}, Tuple{T}, Tuple{AbstractArray{T, N}, Tuple{Vararg{Int64, N}}}} where {T, N, C}
Zarr.Metadata :: Tuple{AbstractDict, Any}
JSON.Writer.lower :: Tuple{Zarr.Metadata}
Zarr.zopen_noerr :: Union{Tuple{Zarr.AbstractStore}, Tuple{Zarr.AbstractStore, Any}}
Zarr.ConsolidatedStore
Zarr.gcs_credentials :: Tuple{Any, Any, Any}
Zarr.gcs_credentials :: Tuple{}
Zarr.subkeys
Zarr.HTTPStore
Zarr.chunkindices :: Tuple{ZArray}
Zarr.uncompress_raw! :: Union{Tuple{N}, Tuple{Any, ZArray{<:Any, N}, Any}} where N
Base.resize! :: Union{Tuple{N}, Tuple{T}, Tuple{ZArray{T, N}, Tuple{Vararg{T, N}} where T}} where {T, N}
Zarr.storageratio :: Tuple{ZArray}
These are docstrings in the checked modules (configured with the modules keyword)
that are not included in @docs or @autodocs blocks.
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