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ultima Microscope Ome Xml Stage Location Extractor : UW-LOCI

-python script to extract location for Ultima Microscope OME-XML / tiff or env.

root

  • Sequence >> Frame >> PVStateShard >> PVStateValue
  • Root PVScan
    • ['Sequence', 'SystemIDs', 'PVStateShard']
      • ['Frame', 'PVStateShard']
      • *['ExtraParameters', 'File', 'PVStateShard']
          • ['PVStateValue'] >> key value +descp
          • *['IndexedValues'] >> key value index +descp
          • *['SubindexedValues'] >> key value index subindex +descp

location

[('index', 'XAxis')] [('subindex', '0'), ('value', '-41468.71')] [('index', 'YAxis')] [('subindex', '0'), ('value', '7607.47')] [('index', 'ZAxis')] [('subindex', '0'), ('value', '2444.85')]

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LOCI Microscope OME to LOC txt for Stitching

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