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Minor Maintenance Tasks #20

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merged 2 commits into from
Jul 8, 2024
Merged

Minor Maintenance Tasks #20

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5ee6925
remove disused attribute
JacksonBurns Jul 8, 2024
131a94e
automatically retry the tests if network drops, etc
JacksonBurns Jul 8, 2024
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9 changes: 7 additions & 2 deletions .github/workflows/ci.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -57,8 +57,13 @@ jobs:
python -m pip install .[dev]
python -m pip install coverage
- name: Run Tests
run: |
coverage run --source=. --omit=py2opsin/__init__.py,setup.py,test/* -m unittest discover
uses: nick-fields/retry@v3
with:
max_attempts: 3
timeout_minutes: 15
shell: bash
command: |
micromamba run -n temp coverage run --source=. --omit=py2opsin/__init__.py,setup.py,test/* -m unittest discover
- name: Show Coverage
run: |
coverage report -m
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4 changes: 0 additions & 4 deletions test/test_performance.py
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Expand Up @@ -15,10 +15,6 @@ class Test_py2opsin_performance(unittest.TestCase):

@classmethod
def setUpClass(self):
self.jar_path = os.path.join(
os.getcwd(),
"opsin-cli-2.7.0-jar-with-dependencies.jar",
)
# list of molecules taken from IUPAC Dissociation Constants dataset
# https://zenodo.org/record/7236453
self.compound_list = [
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