update .rd files and NAMESPACE

JRaviLab · Oct 12, 2024 · e45bb21 · e45bb21
1 parent 6500e36
commit e45bb21
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Showing 10 changed files with 8 additions and 214 deletions.
diff --git a/NAMESPACE b/NAMESPACE
@@ -85,8 +85,8 @@ export(rename_fasta)
 export(replaceQuestionMarks)
 export(reveql)
 export(reverse_operon)
-export(run_deltablast)
-export(run_rpsblast)
+export(runDeltaBlast)
+export(runRPSBlast)
 export(selectLongestDuplicate)
 export(sendJobStatusEmail)
 export(shortenLineage)

diff --git a/man/countbycolumn.Rd b/man/countbycolumn.Rd
diff --git a/man/filterbydomains.Rd b/man/filterbydomains.Rd
diff --git a/man/filterbyfrequency.Rd b/man/filterbyfrequency.Rd
diff --git a/man/findparalogs.Rd b/man/findparalogs.Rd
diff --git a/man/run_deltablast.Rd → man/runDeltaBlast.Rd b/man/run_deltablast.Rd → man/runDeltaBlast.Rd
diff --git a/man/run_rpsblast.Rd → man/runRPSBlast.Rd b/man/run_rpsblast.Rd → man/runRPSBlast.Rd
diff --git a/man/summarizebylineage.Rd b/man/summarizebylineage.Rd
diff --git a/man/totalgencontextordomarchcounts.Rd b/man/totalgencontextordomarchcounts.Rd
diff --git a/man/words2wordcounts.Rd b/man/words2wordcounts.Rd