Get ready for JOSS submission #30
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| name: test_coverage | |
| on: | |
| push: | |
| branches: | |
| - main | |
| jobs: | |
| test: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| r-version: ['4.1.0'] | |
| env: | |
| R_REMOTES_NO_ERRORS_FROM_WARNINGS: true | |
| GITHUB_PAT: ${{ secrets.GH_PAT}} | |
| steps: | |
| - name: Checkout code | |
| uses: actions/checkout@v2 | |
| - name: Set up R ${{ matrix.r-version }} | |
| uses: r-lib/actions/setup-r@v2-branch | |
| with: | |
| r-version: ${{ matrix.r-version }} | |
| - name: Set up pandoc | |
| uses: r-lib/actions/setup-pandoc@v1 | |
| - name: Set up TinyTeX | |
| uses: r-lib/actions/setup-tinytex@v2-branch | |
| - name: Cache R packages | |
| uses: actions/cache@v2 | |
| with: | |
| path: ${{ env.R_LIBS_USER }} | |
| key: ${{ runner.os }}-${{ hashFiles('.github/R-version') }} | |
| restore-keys: ${{ runner.os }}- | |
| - name: Ubuntu config | |
| run: | | |
| sudo add-apt-repository ppa:ubuntugis/ppa | |
| sudo apt-get update | |
| sudo apt-get install -y libcurl4-openssl-dev libssl-dev libxml2-dev libudunits2-dev libgdal-dev libgeos-dev libproj-dev libmagick++-dev libavfilter-dev | |
| - name: Install dependencies | |
| run: | | |
| install.packages(c("remotes","rcmdcheck"), repos = "https://cloud.r-project.org") | |
| remotes::install_deps(dependencies = TRUE) | |
| shell: Rscript {0} | |
| - name: Test coverage | |
| run: | | |
| Rscript -e "remotes::install_cran('covr')" | |
| Rscript -e "covr::codecov(token = Sys.getenv('CODECOV_TOKEN'))" |