Skip to content

Commit

Permalink
Apply automatic changes
Browse files Browse the repository at this point in the history
  • Loading branch information
IndrajeetPatil authored and github-actions[bot] committed Jul 20, 2024
1 parent 11e41cc commit 32f6f98
Show file tree
Hide file tree
Showing 3 changed files with 29 additions and 18 deletions.
14 changes: 8 additions & 6 deletions README.html
Original file line number Diff line number Diff line change
Expand Up @@ -2,7 +2,7 @@
<html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en"><head>

<meta charset="utf-8">
<meta name="generator" content="quarto-1.6.1">
<meta name="generator" content="quarto-1.6.3">

<meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">

Expand Down Expand Up @@ -193,7 +193,7 @@ <h1 class="title">Awesome R Package Development Tools</h1>
<div>
<div class="quarto-title-meta-heading">Modified</div>
<div class="quarto-title-meta-contents">
<p class="date-modified">July 14, 2024</p>
<p class="date-modified">July 20, 2024</p>
</div>
</div>

Expand Down Expand Up @@ -305,6 +305,8 @@ <h1>Package configuration</h1>
<ul>
<li><p><a href="https://rstudio.github.io/config/"><code>{config}</code></a> (to manage environment specific configuration values)</p></li>
<li><p><a href="https://cran.r-project.org/package=dotenv"><code>{dotenv}</code></a> (to load environment variables from <code>.env</code> files)</p></li>
<li><p><a href="https://dgkf.github.io/options/"><code>{options}</code></a> (provides simple mechanisms for defining and interpreting package options)</p></li>
<li><p><a href="https://cran.r-project.org/package=potions"><code>{potions}</code></a> (to update and retrieve options, either in the workspace or during package development, without overwriting global options)</p></li>
</ul>
</section>
<section id="package-management-tools" class="level1">
Expand Down Expand Up @@ -545,6 +547,7 @@ <h2 class="anchored" data-anchor-id="code-coverage">Code coverage</h2>
<h2 class="anchored" data-anchor-id="code-quality">Code quality</h2>
<ul>
<li><p><a href="https://github.com/r-lib/lintr/"><code>{lintr}</code></a> (static code analysis)</p></li>
<li><p><a href="https://flint.etiennebacher.com/"><code>{flint}</code></a> (to fix lints found by <code>{lintr}</code>)</p></li>
<li><p><a href="https://openpharma.github.io/roxylint/index.html"><code>{roxylint}</code></a> (to lint <code>{roxygen2}</code>-generated documentation)</p></li>
<li><p><a href="https://jorischau.github.io/checkglobals/index.html"><code>{checkglobals}</code></a> (to check R-packages for globals and imports)</p></li>
<li><p><a href="https://github.com/duncantl/CodeDepends"><code>{CodeDepends}</code></a> (analysis of R code for reproducible research and code view)</p></li>
Expand Down Expand Up @@ -817,7 +820,6 @@ <h1>Sundry 🗒</h1>
<li><p><a href="https://CRAN.R-project.org/package=rfold"><code>{rfold}</code></a> (to work with many R folders within an R package)</p></li>
<li><p><a href="https://github.com/the-y-company/many"><code>{many}</code></a> (to create R packages from many directories)</p></li>
<li><p><a href="https://github.com/dreamRs/prefixer/"><code>{prefixer}</code></a> (prefix function with their namespace )</p></li>
<li><p><a href="https://dgkf.github.io/options/"><code>{options}</code></a> (provides simple mechanisms for defining and interpreting package options)</p></li>
<li><p><a href="https://hughjonesd.github.io/onetime/"><code>{onetime}</code></a> (for package authors to run code only once for a given user on a given computer)</p></li>
<li><p><a href="https://rstudio.github.io/rstudioapi/"><code>{rstudioapi}</code></a> (to conditionally access the RStudio API from CRAN packages)</p></li>
<li><p><a href="https://hughjonesd.shinyapps.io/rcheology/"><code>{rcheology}</code></a> (to access data on base packages for previous versions of R)</p></li>
Expand All @@ -844,9 +846,9 @@ <h1>Session information</h1>
<span id="cb1-9"><a href="#cb1-9" aria-hidden="true" tabindex="-1"></a> collate C.UTF<span class="dv">-8</span></span>
<span id="cb1-10"><a href="#cb1-10" aria-hidden="true" tabindex="-1"></a> ctype C.UTF<span class="dv">-8</span></span>
<span id="cb1-11"><a href="#cb1-11" aria-hidden="true" tabindex="-1"></a> tz UTC</span>
<span id="cb1-12"><a href="#cb1-12" aria-hidden="true" tabindex="-1"></a> date <span class="dv">2024-07-14</span></span>
<span id="cb1-12"><a href="#cb1-12" aria-hidden="true" tabindex="-1"></a> date <span class="dv">2024-07-20</span></span>
<span id="cb1-13"><a href="#cb1-13" aria-hidden="true" tabindex="-1"></a> pandoc <span class="dv">3</span>.<span class="fl">2.1</span> <span class="sc">@</span> <span class="er">/</span>opt<span class="sc">/</span>hostedtoolcache<span class="sc">/</span>pandoc<span class="sc">/</span><span class="dv">3</span>.<span class="fl">2.1</span><span class="sc">/</span>x64<span class="sc">/</span> (via rmarkdown)</span>
<span id="cb1-14"><a href="#cb1-14" aria-hidden="true" tabindex="-1"></a> quarto <span class="dv">1</span>.<span class="fl">6.1</span> <span class="sc">@</span> <span class="er">/</span>usr<span class="sc">/</span>local<span class="sc">/</span>bin<span class="sc">/</span>quarto</span>
<span id="cb1-14"><a href="#cb1-14" aria-hidden="true" tabindex="-1"></a> quarto <span class="dv">1</span>.<span class="fl">6.3</span> <span class="sc">@</span> <span class="er">/</span>usr<span class="sc">/</span>local<span class="sc">/</span>bin<span class="sc">/</span>quarto</span>
<span id="cb1-15"><a href="#cb1-15" aria-hidden="true" tabindex="-1"></a></span>
<span id="cb1-16"><a href="#cb1-16" aria-hidden="true" tabindex="-1"></a>─ Packages ───────────────────────────────────────────────────────────────────</span>
<span id="cb1-17"><a href="#cb1-17" aria-hidden="true" tabindex="-1"></a> package <span class="sc">*</span> version <span class="fu">date</span> (UTC) lib source</span>
Expand Down Expand Up @@ -878,7 +880,7 @@ <h1>Session information</h1>
<span id="cb1-43"><a href="#cb1-43" aria-hidden="true" tabindex="-1"></a> tools <span class="dv">4</span>.<span class="fl">4.1</span> <span class="dv">2024-06-14</span> [<span class="dv">3</span>] local</span>
<span id="cb1-44"><a href="#cb1-44" aria-hidden="true" tabindex="-1"></a> utils <span class="sc">*</span> <span class="dv">4</span>.<span class="fl">4.1</span> <span class="dv">2024-06-14</span> [<span class="dv">3</span>] local</span>
<span id="cb1-45"><a href="#cb1-45" aria-hidden="true" tabindex="-1"></a> withr <span class="dv">3</span>.<span class="fl">0.0</span> <span class="dv">2024-01-16</span> [<span class="dv">1</span>] RSPM</span>
<span id="cb1-46"><a href="#cb1-46" aria-hidden="true" tabindex="-1"></a> xfun <span class="fl">0.45</span> <span class="dv">2024-06-16</span> [<span class="dv">1</span>] RSPM</span>
<span id="cb1-46"><a href="#cb1-46" aria-hidden="true" tabindex="-1"></a> xfun <span class="fl">0.46</span> <span class="dv">2024-07-18</span> [<span class="dv">1</span>] RSPM</span>
<span id="cb1-47"><a href="#cb1-47" aria-hidden="true" tabindex="-1"></a> xml2 <span class="dv">1</span>.<span class="fl">3.6</span> <span class="dv">2023-12-04</span> [<span class="dv">1</span>] RSPM</span>
<span id="cb1-48"><a href="#cb1-48" aria-hidden="true" tabindex="-1"></a> yaml <span class="dv">2</span>.<span class="fl">3.9</span> <span class="dv">2024-07-05</span> [<span class="dv">1</span>] RSPM</span>
<span id="cb1-49"><a href="#cb1-49" aria-hidden="true" tabindex="-1"></a></span>
Expand Down
19 changes: 13 additions & 6 deletions README.md
Original file line number Diff line number Diff line change
Expand Up @@ -205,6 +205,13 @@ whether the package is meant to be submitted to CRAN or Bioconductor.
- [`{dotenv}`](https://cran.r-project.org/package=dotenv) (to load
environment variables from `.env` files)

- [`{options}`](https://dgkf.github.io/options/) (provides simple
mechanisms for defining and interpreting package options)

- [`{potions}`](https://cran.r-project.org/package=potions) (to update
and retrieve options, either in the workspace or during package
development, without overwriting global options)

# Package management tools

- [`{pkgcache}`](https://cran.r-project.org/package=pkgcache) (to
Expand Down Expand Up @@ -599,6 +606,9 @@ whether the package is meant to be submitted to CRAN or Bioconductor.

- [`{lintr}`](https://github.com/r-lib/lintr/) (static code analysis)

- [`{flint}`](https://flint.etiennebacher.com/) (to fix lints found by
`{lintr}`)

- [`{roxylint}`](https://openpharma.github.io/roxylint/index.html) (to
lint `{roxygen2}`-generated documentation)

Expand Down Expand Up @@ -1012,9 +1022,6 @@ To thank the contributors or maintainers of packages you rely on.
- [`{prefixer}`](https://github.com/dreamRs/prefixer/) (prefix
function with their namespace )

- [`{options}`](https://dgkf.github.io/options/) (provides simple
mechanisms for defining and interpreting package options)

- [`{onetime}`](https://hughjonesd.github.io/onetime/) (for package
authors to run code only once for a given user on a given computer)

Expand Down Expand Up @@ -1052,9 +1059,9 @@ To thank the contributors or maintainers of packages you rely on.
collate C.UTF-8
ctype C.UTF-8
tz UTC
date 2024-07-14
date 2024-07-20
pandoc 3.2.1 @ /opt/hostedtoolcache/pandoc/3.2.1/x64/ (via rmarkdown)
quarto 1.6.1 @ /usr/local/bin/quarto
quarto 1.6.3 @ /usr/local/bin/quarto

Packages ───────────────────────────────────────────────────────────────────
package * version date (UTC) lib source
Expand Down Expand Up @@ -1086,7 +1093,7 @@ To thank the contributors or maintainers of packages you rely on.
tools 4.4.1 2024-06-14 [3] local
utils * 4.4.1 2024-06-14 [3] local
withr 3.0.0 2024-01-16 [1] RSPM
xfun 0.45 2024-06-16 [1] RSPM
xfun 0.46 2024-07-18 [1] RSPM
xml2 1.3.6 2023-12-04 [1] RSPM
yaml 2.3.9 2024-07-05 [1] RSPM

Expand Down
14 changes: 8 additions & 6 deletions index.html
Original file line number Diff line number Diff line change
Expand Up @@ -2,7 +2,7 @@
<html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en"><head>

<meta charset="utf-8">
<meta name="generator" content="quarto-1.6.1">
<meta name="generator" content="quarto-1.6.3">

<meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">

Expand Down Expand Up @@ -193,7 +193,7 @@ <h1 class="title">Awesome R Package Development Tools</h1>
<div>
<div class="quarto-title-meta-heading">Modified</div>
<div class="quarto-title-meta-contents">
<p class="date-modified">July 14, 2024</p>
<p class="date-modified">July 20, 2024</p>
</div>
</div>

Expand Down Expand Up @@ -305,6 +305,8 @@ <h1>Package configuration</h1>
<ul>
<li><p><a href="https://rstudio.github.io/config/"><code>{config}</code></a> (to manage environment specific configuration values)</p></li>
<li><p><a href="https://cran.r-project.org/package=dotenv"><code>{dotenv}</code></a> (to load environment variables from <code>.env</code> files)</p></li>
<li><p><a href="https://dgkf.github.io/options/"><code>{options}</code></a> (provides simple mechanisms for defining and interpreting package options)</p></li>
<li><p><a href="https://cran.r-project.org/package=potions"><code>{potions}</code></a> (to update and retrieve options, either in the workspace or during package development, without overwriting global options)</p></li>
</ul>
</section>
<section id="package-management-tools" class="level1">
Expand Down Expand Up @@ -545,6 +547,7 @@ <h2 class="anchored" data-anchor-id="code-coverage">Code coverage</h2>
<h2 class="anchored" data-anchor-id="code-quality">Code quality</h2>
<ul>
<li><p><a href="https://github.com/r-lib/lintr/"><code>{lintr}</code></a> (static code analysis)</p></li>
<li><p><a href="https://flint.etiennebacher.com/"><code>{flint}</code></a> (to fix lints found by <code>{lintr}</code>)</p></li>
<li><p><a href="https://openpharma.github.io/roxylint/index.html"><code>{roxylint}</code></a> (to lint <code>{roxygen2}</code>-generated documentation)</p></li>
<li><p><a href="https://jorischau.github.io/checkglobals/index.html"><code>{checkglobals}</code></a> (to check R-packages for globals and imports)</p></li>
<li><p><a href="https://github.com/duncantl/CodeDepends"><code>{CodeDepends}</code></a> (analysis of R code for reproducible research and code view)</p></li>
Expand Down Expand Up @@ -817,7 +820,6 @@ <h1>Sundry 🗒</h1>
<li><p><a href="https://CRAN.R-project.org/package=rfold"><code>{rfold}</code></a> (to work with many R folders within an R package)</p></li>
<li><p><a href="https://github.com/the-y-company/many"><code>{many}</code></a> (to create R packages from many directories)</p></li>
<li><p><a href="https://github.com/dreamRs/prefixer/"><code>{prefixer}</code></a> (prefix function with their namespace )</p></li>
<li><p><a href="https://dgkf.github.io/options/"><code>{options}</code></a> (provides simple mechanisms for defining and interpreting package options)</p></li>
<li><p><a href="https://hughjonesd.github.io/onetime/"><code>{onetime}</code></a> (for package authors to run code only once for a given user on a given computer)</p></li>
<li><p><a href="https://rstudio.github.io/rstudioapi/"><code>{rstudioapi}</code></a> (to conditionally access the RStudio API from CRAN packages)</p></li>
<li><p><a href="https://hughjonesd.shinyapps.io/rcheology/"><code>{rcheology}</code></a> (to access data on base packages for previous versions of R)</p></li>
Expand All @@ -844,9 +846,9 @@ <h1>Session information</h1>
<span id="cb1-9"><a href="#cb1-9" aria-hidden="true" tabindex="-1"></a> collate C.UTF<span class="dv">-8</span></span>
<span id="cb1-10"><a href="#cb1-10" aria-hidden="true" tabindex="-1"></a> ctype C.UTF<span class="dv">-8</span></span>
<span id="cb1-11"><a href="#cb1-11" aria-hidden="true" tabindex="-1"></a> tz UTC</span>
<span id="cb1-12"><a href="#cb1-12" aria-hidden="true" tabindex="-1"></a> date <span class="dv">2024-07-14</span></span>
<span id="cb1-12"><a href="#cb1-12" aria-hidden="true" tabindex="-1"></a> date <span class="dv">2024-07-20</span></span>
<span id="cb1-13"><a href="#cb1-13" aria-hidden="true" tabindex="-1"></a> pandoc <span class="dv">3</span>.<span class="fl">2.1</span> <span class="sc">@</span> <span class="er">/</span>opt<span class="sc">/</span>hostedtoolcache<span class="sc">/</span>pandoc<span class="sc">/</span><span class="dv">3</span>.<span class="fl">2.1</span><span class="sc">/</span>x64<span class="sc">/</span> (via rmarkdown)</span>
<span id="cb1-14"><a href="#cb1-14" aria-hidden="true" tabindex="-1"></a> quarto <span class="dv">1</span>.<span class="fl">6.1</span> <span class="sc">@</span> <span class="er">/</span>usr<span class="sc">/</span>local<span class="sc">/</span>bin<span class="sc">/</span>quarto</span>
<span id="cb1-14"><a href="#cb1-14" aria-hidden="true" tabindex="-1"></a> quarto <span class="dv">1</span>.<span class="fl">6.3</span> <span class="sc">@</span> <span class="er">/</span>usr<span class="sc">/</span>local<span class="sc">/</span>bin<span class="sc">/</span>quarto</span>
<span id="cb1-15"><a href="#cb1-15" aria-hidden="true" tabindex="-1"></a></span>
<span id="cb1-16"><a href="#cb1-16" aria-hidden="true" tabindex="-1"></a>─ Packages ───────────────────────────────────────────────────────────────────</span>
<span id="cb1-17"><a href="#cb1-17" aria-hidden="true" tabindex="-1"></a> package <span class="sc">*</span> version <span class="fu">date</span> (UTC) lib source</span>
Expand Down Expand Up @@ -878,7 +880,7 @@ <h1>Session information</h1>
<span id="cb1-43"><a href="#cb1-43" aria-hidden="true" tabindex="-1"></a> tools <span class="dv">4</span>.<span class="fl">4.1</span> <span class="dv">2024-06-14</span> [<span class="dv">3</span>] local</span>
<span id="cb1-44"><a href="#cb1-44" aria-hidden="true" tabindex="-1"></a> utils <span class="sc">*</span> <span class="dv">4</span>.<span class="fl">4.1</span> <span class="dv">2024-06-14</span> [<span class="dv">3</span>] local</span>
<span id="cb1-45"><a href="#cb1-45" aria-hidden="true" tabindex="-1"></a> withr <span class="dv">3</span>.<span class="fl">0.0</span> <span class="dv">2024-01-16</span> [<span class="dv">1</span>] RSPM</span>
<span id="cb1-46"><a href="#cb1-46" aria-hidden="true" tabindex="-1"></a> xfun <span class="fl">0.45</span> <span class="dv">2024-06-16</span> [<span class="dv">1</span>] RSPM</span>
<span id="cb1-46"><a href="#cb1-46" aria-hidden="true" tabindex="-1"></a> xfun <span class="fl">0.46</span> <span class="dv">2024-07-18</span> [<span class="dv">1</span>] RSPM</span>
<span id="cb1-47"><a href="#cb1-47" aria-hidden="true" tabindex="-1"></a> xml2 <span class="dv">1</span>.<span class="fl">3.6</span> <span class="dv">2023-12-04</span> [<span class="dv">1</span>] RSPM</span>
<span id="cb1-48"><a href="#cb1-48" aria-hidden="true" tabindex="-1"></a> yaml <span class="dv">2</span>.<span class="fl">3.9</span> <span class="dv">2024-07-05</span> [<span class="dv">1</span>] RSPM</span>
<span id="cb1-49"><a href="#cb1-49" aria-hidden="true" tabindex="-1"></a></span>
Expand Down

0 comments on commit 32f6f98

Please sign in to comment.