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Allow reference of optical path for annotations measurements #194

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Allow reference of optical path for annotations measurements #194

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Commits on Jul 6, 2022

  1. Add warning when empty segmentation is passed with omit_empty_frames

    Chris Bridge committed Jul 6, 2022
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Commits on Jul 7, 2022

  1. Change UserWarning to logger.warning

    @CPBridge
    CPBridge committed Jul 7, 2022
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Commits on Aug 5, 2022

  1. Allow reference of optical path for measurements

    @hackermd
    hackermd committed Aug 5, 2022
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  2. Add property to access referenced images

    @hackermd
    hackermd committed Aug 5, 2022
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  3. Provide referenced images for measurements

    @hackermd
    hackermd committed Aug 5, 2022
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Commits on Aug 15, 2022

  1. Remove module level imports of module data (#196)

    @CPBridge
    CPBridge authored Aug 15, 2022
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  2. Minor fixes to segmentation (#195) 

    * Minor fixes to segmentation

* Fix docstring typo in type
    @CPBridge
    CPBridge authored Aug 15, 2022
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Commits on Aug 19, 2022

  1. Implement TID 1601 Image Library Entry (#83) 

    * Fix recording of evidence in structured reports

* Assert that evidence is provided for references

* Use sets for comparison and avoid duplicates

* Add test for report referencing multiple studies

* Use datetime workaround for python 3.6 support

* Added image_library_entries to TID 1500

Co-authored-by: Sean Doyle <[email protected]>
Co-authored-by: hackermd <[email protected]>
Co-authored-by: Christopher Bridge <[email protected]>
    @seandoyle @hackermd
    4 people authored Aug 19, 2022
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  2. Increase package version

    @hackermd
    hackermd committed Aug 19, 2022
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Commits on Oct 10, 2022

  1. Move pylibjpeg-libjpeg to optional dependency

    Chris Bridge committed Oct 10, 2022
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  2. Add skips for tests that need libjpeg, restructure segmentation tests

    Chris Bridge committed Oct 10, 2022
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  3. Remove unnecessary import error

    Christopher Bridge committed Oct 10, 2022
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  4. Update installation docs

    Christopher Bridge committed Oct 10, 2022
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  5. Bump python version in installation docs to match setup.py

    Chris Bridge committed Oct 10, 2022
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  6. Add libjpeg to CI workflow

    Chris Bridge committed Oct 10, 2022
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  7. Add workflow with and without libjpeg

    Chris Bridge committed Oct 10, 2022
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Commits on Oct 11, 2022

  1. Apply suggestions from code review 

    Co-authored-by: Markus D. Herrmann <[email protected]>
    @CPBridge @hackermd
    CPBridge and hackermd authored Oct 11, 2022
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  2. Update docs/installation.rst 

    Co-authored-by: Markus D. Herrmann <[email protected]>
    @CPBridge @hackermd
    CPBridge and hackermd authored Oct 11, 2022
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  3. remove openjpeg from deps, fix installation guide

    Chris Bridge committed Oct 11, 2022
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Commits on Oct 28, 2022

  1. Add citation file (#204)

    @hackermd
    hackermd authored Oct 28, 2022
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  2. Use deepcopy for CodedConcept.from_dataset()

    Chris Bridge committed Oct 28, 2022
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Commits on Nov 9, 2022

  1. Merge pull request #205 from herrmannlab/fix_coded_concept_copy 

    Use deepcopy for CodedConcept.from_dataset()
    @CPBridge
    CPBridge authored Nov 9, 2022
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  2. Merge pull request #201 from herrmannlab/make_pylibjpeg-libjpeg_optional 

    Make pylibjpeg-libjpeg optional
    @CPBridge
    CPBridge authored Nov 9, 2022
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  3. Merge pull request #181 from herrmannlab/empty_seg_error_message 

    Add warning when empty segmentation is passed with omit_empty_frames
    @CPBridge
    CPBridge authored Nov 9, 2022
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  4. Increase package version for release (#206) 

    Co-authored-by: Chris Bridge <[email protected]>
    @CPBridge
    CPBridge and Chris Bridge authored Nov 9, 2022
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Commits on Nov 18, 2022

  1. Allow reference of optical path for measurements

    @hackermd
    hackermd committed Nov 18, 2022
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  2. Add property to access referenced images

    @hackermd
    hackermd committed Nov 18, 2022
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  3. Provide referenced images for measurements

    @hackermd
    hackermd committed Nov 18, 2022
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  4. Merge branch 'enhancement/annotations-intensity-measurements' of gith… 

    …ub:herrmannlab/highdicom into enhancement/annotations-intensity-measurements
    @hackermd
    hackermd committed Nov 18, 2022
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Commits on Apr 1, 2023

  1. Update src/highdicom/ann/content.py 

    Co-authored-by: Chris Bridge <[email protected]>
    @hackermd @CPBridge
    hackermd and CPBridge authored Apr 1, 2023
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