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Bug fix: fix check for normalized variant #113

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Bug fix: fix check for normalized variant #113

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@nh13 nh13 commented Apr 4, 2019

This variant is normalized (confirmed by running vt) but wrongly reported as not normalized when running with --forceGT and supplying the known VCF (in this case dbsnp).

chr22   16647586        rs144514652     G       GATTCCCTG,GATTCCCTGTCTTCTCTCCCC .       .       RS=144514652;RSPOS=16647586;dbSNPBuildID=134;SSR=0;SAO=0;VP=0x05000008000517002e000200;GENEINFO=TPTEP1:387590;WGT=1;VC=DIV;INT;ASP;VLD;G5A;G5;KGPhase3;CAF=0.3492,.,0.6508;COMMON=1;TOPMED=0.52381179918450560,.,0.47611652650356778

@nh13
Bug fix: fix check for normalized variant
3dadc85 
This variant is normalized but wrongly reported as not normalized:
chr22   16647586    .   G   GATTCCCTG,GATTCCCTGTCTTCTCTCCCC
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