Skip to content

Commit

Permalink
URLs for hp.db -> hp.db.gz
Browse files Browse the repository at this point in the history
  • Loading branch information
caufieldjh authored Feb 15, 2024
1 parent b5f4e49 commit a2e00f3
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions README.md
Original file line number Diff line number Diff line change
Expand Up @@ -20,7 +20,7 @@ sqlite> SELECT * FROM rdfs_label_statement WHERE value LIKE 'Abnormality of %';
|HP:0000032|HP:0000032|rdfs:label||Abnormality of male external genitalia|xsd:string||


Ready-made SQLite3 builds can also be downloaded for any ontology in [OBO](http://obofoundry.org), using URLs such as https://s3.amazonaws.com/bbop-sqlite/hp.db
Ready-made SQLite3 builds can also be downloaded for any ontology in [OBO](http://obofoundry.org), using URLs such as https://s3.amazonaws.com/bbop-sqlite/hp.db.gz

[relation-graph](https://github.com/balhoff/relation-graph/) is used to pre-generate tables of [entailed edges](https://incatools.github.io/semantic-sql/EntailedEdge/). For example,
all is-a and part-of ancestors of [finger](http://purl.obolibrary.org/obo/UBERON_0002389) in Uberon:
Expand Down Expand Up @@ -73,7 +73,7 @@ semsql download obi -o obi.db

Or simply download using URL of the form:

- https://s3.amazonaws.com/bbop-sqlite/hp.db
- https://s3.amazonaws.com/bbop-sqlite/hp.db.gz

## Attaching databases

Expand Down

0 comments on commit a2e00f3

Please sign in to comment.