pages build and deployment #20
pages-build-deployment
on: dynamic
build
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report-build-status
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deploy
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Annotations
1 error and 1 warning
build
Logging at level: debug Configuration file: /github/workspace/./_config.yml GitHub Pages: github-pages v231 GitHub Pages: jekyll v3.9.5 Theme: jekyll-theme-primer Theme source: /usr/local/bundle/gems/jekyll-theme-primer-0.6.0 Requiring: jekyll-github-metadata Requiring: jekyll-seo-tag Requiring: jekyll-coffeescript Requiring: jekyll-commonmark-ghpages Requiring: jekyll-gist Requiring: jekyll-github-metadata Requiring: jekyll-paginate Requiring: jekyll-relative-links Requiring: jekyll-optional-front-matter Requiring: jekyll-readme-index Requiring: jekyll-default-layout Requiring: jekyll-titles-from-headings GitHub Metadata: Initializing... Source: /github/workspace/. Destination: /github/workspace/./_site Incremental build: disabled. Enable with --incremental Generating... EntryFilter: excluded /README.md EntryFilter: excluded /Gemfile.lock EntryFilter: excluded /Gemfile Reading: modules/sars-cov-2-sequencing/_posts/2024-01-01-sars-cov-2-introduction.md Reading: modules/unix-linux-introduction/_posts/2024-01-01-unix-linux-introduction.md Reading: modules/unix-linux-introduction/_posts/2024-01-08-unix-exercise.md Reading: modules/unix-linux-introduction/_posts/2024-01-03-linux-introduction.md Reading: modules/unix-linux-introduction/_posts/2024-01-02-unix-anatomy.md Reading: modules/unix-linux-introduction/_posts/2024-01-04-unix-filesystems.md Reading: modules/unix-linux-introduction/_posts/2024-01-06-shell-unix-commands.md Reading: modules/unix-linux-introduction/_posts/2024-01-05-interacting-with-shell.md Reading: modules/unix-linux-introduction/_posts/2024-01-07-other-commands.md Reading: modules/setup/_posts/2000-01-01-getting-started.md Reading: modules/setup/_posts/2000-01-03-course-template.md Reading: modules/setup/_posts/2000-01-02-required-setup.md Reading: modules/data-management-and-sharing/_posts/2024-01-01-data-management.md Reading: modules/content/_posts/2000-01-02-homepage.md Reading: modules/content/_posts/2000-01-04-submodules.md Reading: modules/content/_posts/2000-01-01-markdown-and-media.md Reading: modules/content/_posts/2000-01-03-modules.md Reading: modules/customize/_posts/2000-01-01-single-pages.md Reading: modules/customize/_posts/2000-01-06-licensing.md Reading: modules/customize/_posts/2000-01-05-favicon.md Reading: modules/customize/_posts/2000-01-03-custom-domain.md Reading: modules/customize/_posts/2000-01-04-google-analytics.md Reading: modules/customize/_posts/2000-01-02-top-menu.md Reading: modules/galaxy-workflows-for-sars-cov-2-analysis/_posts/2024-01-01-galaxy-introduction.md Reading: modules/phylogenomics/_posts/2024-01-01-phylogenetics.md Reading: modules/phylogenomics/_posts/2024-01-02-phylogenetics-practicals.md Reading: modules/ngs-data-analysis/_posts/2024-01-10-lineage-assignment.md Reading: modules/ngs-data-analysis/_posts/2024-01-07-variant-calling.md Reading: modules/ngs-data-analysis/_posts/2024-01-02-project-organization.md Reading: modules/ngs-data-analysis/_posts/2024-01-06-primertrimming.md Reading: modules/ngs-data-analysis/_posts/2024-01-05-alignment.md Reading: modules/ngs-data-analysis/_posts/2024-01-03-environment-preparation.md Reading: modules/ngs-data-analysis/_posts/2024-01-01-background.md Reading: modules/ngs-data-analysis/_posts/2024-01-08-variant-annotation.md Reading: modules/ngs-data-analysis/_posts/2024-01-04-sequence-qc.md Reading: modules/ngs-data-analysis/_posts/2024-01-09-consensus-genome.md Generating: JekyllOptionalFrontMatter::Generator finished in 0.000138989 seconds. Generating: JekyllReadmeIndex::Generator finished in 0.001809319 seconds. Generating: Jekyll::Paginate::Pagination finished in 4.499e-06 seconds. Generating: JekyllRelativeLinks::Generator finished in 0.000297823 seconds. Generating: JekyllDefaultLayout::Generator finished in 0.000253882 seconds. Requiring: kramdown-parser-gfm Generating: JekyllTitlesFromHeadings::Generator finished in 0.00837577 seconds. Rendering: modules/content/_posts/2000-01-01-markdown-and-media.md Pre-Render Hooks: modules/content/_posts/2000-01-01-markdown-and-media.md Rendering Liquid: modules/content/_pos
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build
The github-pages gem can't satisfy your Gemfile's dependencies. If you want to use a different Jekyll version or need additional dependencies, consider building Jekyll site with GitHub Actions: https://jekyllrb.com/docs/continuous-integration/github-actions/
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