fix: remove Snakemake environment from report rule #2657
alethomasmain.yml
on: pull_request
Cancel-previous-jobs
3s
Matrix: Benchmarks-Tests
Matrix: Technology-Tests
Annotations
19 errors and 11 warnings
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Benchmarks-Tests (benchmark_non_sars_cov_2)
The job was canceled because "benchmark_reads" failed.
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Benchmarks-Tests (benchmark_non_sars_cov_2)
The operation was canceled.
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Benchmarks-Tests (compare_assemblers)
The job was canceled because "benchmark_reads" failed.
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Benchmarks-Tests (compare_assemblers)
The operation was canceled.
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Benchmarks-Tests (benchmark_mixtures)
The job was canceled because "benchmark_reads" failed.
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Benchmarks-Tests (benchmark_mixtures)
The operation was canceled.
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Benchmarks-Tests (benchmark_strain_calling)
The job was canceled because "benchmark_reads" failed.
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Benchmarks-Tests (benchmark_strain_calling)
The operation was canceled.
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Benchmarks-Tests (benchmark_assembly)
The job was canceled because "benchmark_reads" failed.
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Benchmarks-Tests (benchmark_assembly)
The operation was canceled.
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Technology-Tests (all, ion, amplicon)
The job was canceled because "all_illumina_amplicon" failed.
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Technology-Tests (all, all, shotgun)
The job was canceled because "all_illumina_amplicon" failed.
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Technology-Tests (all, ont, amplicon)
The job was canceled because "all_illumina_amplicon" failed.
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Technology-Tests (all, all, amplicon)
The job was canceled because "all_illumina_amplicon" failed.
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Technology-Tests (all, illumina, shotgun)
The job was canceled because "all_illumina_amplicon" failed.
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Technology-Tests (all, ont, shotgun)
The job was canceled because "all_illumina_amplicon" failed.
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Technology-Tests (all, ont, shotgun)
The operation was canceled.
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Technology-Tests (all, ion, shotgun)
The job was canceled because "all_illumina_amplicon" failed.
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Technology-Tests (all, ion, shotgun)
The operation was canceled.
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Cancel-previous-jobs
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: khan/[email protected]. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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Cancel-previous-jobs
The following actions uses node12 which is deprecated and will be forced to run on node16: khan/[email protected]. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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Technology-Tests (all -np, ont, amplicon)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/setup-python@v4. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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Technology-Tests (all -np, illumina, amplicon)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/setup-python@v4. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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Technology-Tests (all -np, all, shotgun)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/setup-python@v4. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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Technology-Tests (all -np, ion, amplicon)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/setup-python@v4. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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Technology-Tests (all -np, illumina, shotgun)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/setup-python@v4. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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Technology-Tests (all -np, ont, shotgun)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/setup-python@v4. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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Technology-Tests (all -np, ion, shotgun)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/setup-python@v4. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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Technology-Tests (all -np, all, amplicon)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/setup-python@v4. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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Technology-Tests (all, illumina, amplicon)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/setup-python@v4. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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