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Drug Repurposing for Basal Breast CancerSubpopulations Using Modular Network

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Guide for Reproducibility

Main workflow

  1. proprocessing
    • prepro-mRNA.R
    • prepro-methy.R
    • prepro-miRNA.R
  2. umap_gmm.R
    • umap_plot.R
  3. surv_plot.R
  4. cor_matrix.R
  5. net_communities
  6. L1000_subset.R
  7. enricheDrugs.R

Supplementary process

  • xgb_monet.R