getGroupFragments

GreenleafLab · Jul 22, 2022 · 2cdc299 · 2cdc299
1 parent 23ef3cf
commit 2cdc299
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Showing 11 changed files with 15 additions and 15 deletions.
diff --git a/.DS_Store b/.DS_Store
diff --git a/NAMESPACE b/NAMESPACE
@@ -62,7 +62,6 @@ export(createGenomeAnnotation)
 export(createLogFile)
 export(customEnrichment)
 export(enrichHeatmap)
-export(exportGroupFragments)
 export(exportGroupSE)
 export(exportPeakMatrixForSTREAM)
 export(extendGR)
@@ -96,6 +95,7 @@ export(getGenes)
 export(getGenome)
 export(getGenomeAnnotation)
 export(getGroupBW)
+export(getGroupFragments)
 export(getGroupSE)
 export(getGroupSummary)
 export(getImputeWeights)

diff --git a/R/GroupExport.R b/R/GroupExport.R
@@ -510,11 +510,11 @@ getGroupBW <- function(
 #' frags <- exportGroupFragments(proj, groupBy = "Clusters")
 #'
 #' @export
-exportGroupFragments <- function(
+getGroupFragments <- function(
   ArchRProj = NULL,
   groupBy = "Clusters",
   threads = getArchRThreads(),
-  logFile = createLogFile("exportGroupFragments")
+  logFile = createLogFile("getGroupFragments")
   ){
 
   #Cell Col Data

diff --git a/man/addCoAccessibility.Rd b/man/addCoAccessibility.Rd
diff --git a/man/addGeneScoreMatrix.Rd b/man/addGeneScoreMatrix.Rd
diff --git a/man/addIterativeLSI.Rd b/man/addIterativeLSI.Rd
diff --git a/man/addMotifAnnotations.Rd b/man/addMotifAnnotations.Rd
diff --git a/man/createArrowFiles.Rd b/man/createArrowFiles.Rd
diff --git a/man/exportGroupFragments.Rd → man/getGroupFragments.Rd b/man/exportGroupFragments.Rd → man/getGroupFragments.Rd
diff --git a/man/getPeak2GeneLinks.Rd b/man/getPeak2GeneLinks.Rd
diff --git a/man/plotPeak2GeneHeatmap.Rd b/man/plotPeak2GeneHeatmap.Rd