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fix formatting issues
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gowerc committed Aug 14, 2024
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9 changes: 8 additions & 1 deletion vignettes/statistical-specification.Rmd
Original file line number Diff line number Diff line change
Expand Up @@ -76,6 +76,8 @@ Where:
- $\lambda > 0$ is the rate parameter
- $\gamma > 0$ is the shape parameter
Note that with $\gamma = 1$ we obtain the exponential distribution as a special case.


## Log-Logistic Distribution

$$
Expand Down Expand Up @@ -166,6 +168,7 @@ Where:


If using the non-centred parameterisation then the following alternative formulation is used:

$$
\begin{align*}
b_i &= exp(\mu_{bl(i)} + \omega_{b l(i)} * \eta_{b i}) \\
Expand All @@ -179,6 +182,7 @@ g_i &= exp(\mu_{gk(i)} + \omega_{g k(i)} * \eta_{g i}) \\
$$

Where:

* $\eta_{\theta i}$ is a random effects offset on parameter $\theta$ for subject $i$


Expand Down Expand Up @@ -291,12 +295,13 @@ Where:


If using the non-centred parameterisation then the following alternative formulation is used:

$$
\begin{align*}
b_i &= exp(\mu_{bl(i)} + \omega_{b l(i)} * \eta_{b i}) \\
s_i &= exp(\mu_{sk(i)} + \omega_{s k(i)} * \eta_{s i}) \\
g_i &= exp(\mu_{gk(i)} + \omega_{g k(i)} * \eta_{g i}) \\
\phi_i &= \text{logistic}(\mu_{gk(i)} + \omega_{\phi k(i)} * \eta_{\phi i}) \\
\phi_i &= \text{logistic}(\mu_{\phi k(i)} + \omega_{\phi k(i)} * \eta_{\phi i}) \\
\\
\eta_{b i} &\sim N(0, 1)\\
\eta_{s i} &\sim N(0, 1) \\
Expand All @@ -306,6 +311,7 @@ g_i &= exp(\mu_{gk(i)} + \omega_{g k(i)} * \eta_{g i}) \\
$$

Where:

* $\eta_{\theta i}$ is a random effects offset on parameter $\theta$ for subject $i$


Expand Down Expand Up @@ -418,6 +424,7 @@ Where:


If using the non-centred parameterisation then the following alternative formulation is used:

$$
\begin{align*}
b_i &= exp(\mu_{b l(i)} + \omega_{b l(i)} * \eta_{b i}) \\
Expand Down

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