algoFinalProject

Develop and test heuristics for Maximum Weight Quartet Compatibility

Use

java MWQT <-p/g> precise/greedy flag File to read quartets from File to write output to Number of times to run the algorithm Larger values mean more accuracy at the cost of running time <-p/-g precise/greedy flags> -p triggers "precise" mode. It disables half of our greedy choices(Edge returns both neighbors reguardless)

Build

use makefile in project folder EG: $make or $make MWQT

Problem

We are designing a Quartet amalgamation method (a method that constructs a supertree when all source trees are four-leaf trees)