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v12: Updates and fixes for SCM #662

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v12: Updates and fixes for SCM #662

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08eed32
v12: Updates and fixes for SCM
mathomp4 Nov 8, 2024
57db74a
Move to git v12 scminfiles
mathomp4 Nov 8, 2024
bd90c8a
Create input.nml
mathomp4 Nov 8, 2024
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2 changes: 2 additions & 0 deletions scm_run.j
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Original file line number Diff line number Diff line change
Expand Up @@ -32,4 +32,6 @@ cd $EXPDIR

$GEOSBIN/construct_extdata_yaml_list.py GEOS_ChemGridComp.rc

cp fvcore_layout.rc input.nml

$RUN_CMD 1 ./GEOSgcm.x --logging_config 'logging.yaml'
16 changes: 11 additions & 5 deletions scm_setup
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Expand Up @@ -93,7 +93,7 @@ usage ()
echo " --account: account under which to run the job"
echo
echo " Optional argument: "
echo " --num_levels: number of levels (72, 71, 91, 132, 137, and 181 allowed)."
echo " --num_levels: number of levels (default: 181; 72, 71, 91, 132, 137, and 181 allowed)."
echo
echo
}
Expand All @@ -104,7 +104,7 @@ usage ()
selected_case=NULL
expdir=NULL
account=NULL
nlev=72
nlev=181

while [ "${1+defined}" ]
do
Expand Down Expand Up @@ -233,9 +233,13 @@ then
SED="$(command -v sed) "
ISED="$SED -i.macbak "
fi
PRELOAD_COMMAND='DYLD_INSERT_LIBRARIES'
LD_LIBRARY_PATH_CMD='DYLD_LIBRARY_PATH'
else
SED="$(command -v sed) "
ISED="$SED -i "
PRELOAD_COMMAND='LD_PRELOAD'
LD_LIBRARY_PATH_CMD='LD_LIBRARY_PATH'
fi

case $selected_case in
Expand Down Expand Up @@ -372,17 +376,17 @@ BCSTAG="Icarus_Reynolds"

case $SITE in
NCCS)
SCMDIR="/discover/swdev/gmao_SIteam/scm/scminfiles/git-v11.1/"
SCMDIR="/discover/swdev/gmao_SIteam/scm/scminfiles/git-v12.0/"
BCSDIR="/discover/nobackup/projects/gmao/share/gmao_ops/fvInput/g5gcm/bcs/Icarus/$BCSTAG"
CHMDIR="/discover/nobackup/projects/gmao/share/gmao_ops/fvInput_nc3"
;;
NAS)
SCMDIR="/nobackup/gmao_SIteam/ModelData/scminfiles/git-v11.1/"
SCMDIR="/nobackup/gmao_SIteam/ModelData/scminfiles/git-v12.0/"
BCSDIR="/nobackup/gmao_SIteam/ModelData/bcs/Icarus/$BCSTAG"
CHMDIR="/nobackup/gmao_SIteam/ModelData/fvInput_nc3"
;;
GMAO*)
SCMDIR="/ford1/share/gmao_SIteam/ModelData/scminfiles/git-v11.1/"
SCMDIR="/ford1/share/gmao_SIteam/ModelData/scminfiles/git-v12.0/"
BCSDIR="/ford1/share/gmao_SIteam/ModelData/bcs/Icarus/$BCSTAG"
CHMDIR="/ford1/share/gmao_SIteam/ModelData/fvInput_nc3"
;;
Expand Down Expand Up @@ -513,6 +517,8 @@ s?@BATCH_TASKS?$BATCH_TASKS?g
s?@BATCH_TIME?$BATCH_TIME?g
s?@BATCH_GROUP?$BATCH_GROUP?g
s?@BATCH_JOBNAME?$BATCH_JOBNAME?g
s?@PRELOAD_COMMAND?$PRELOAD_COMMAND?g
s?@LD_LIBRARY_PATH_CMD?$LD_LIBRARY_PATH_CMD?g
EOF

$ISED -f $expdir/sedfile $expdir/scm_run.j
Expand Down
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