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Add a test for the empty partition behaviour.
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FLMLMODEL = empty_partitions | ||
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default: input | ||
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input: | ||
# gmsh -2 -bin square.geo | ||
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clean: clean-mesh clean-run-debug | ||
clean-mesh: | ||
# rm -f *.ele *.edge *.node *.msh *.halo | ||
clean-run: | ||
rm -f $(FLMLMODEL)_?*.pvtu $(FLMLMODEL)_?*.vtu | ||
rm -f $(FLMLMODEL).detectors $(FLMLMODEL).stat tmpf* | ||
rm -f fluidity.err-?* fluidity.log-?* | ||
rm -f matrixdump matrixdump.info | ||
rm -f $(FLMLMODEL)_?*_checkpoint.flml | ||
rm -f $(FLMLMODEL)_?*_checkpoint_?*.ele $(FLMLMODEL)_?*_checkpoint_?*.edge $(FLMLMODEL)_?*_checkpoint_?*.halo $(FLMLMODEL)_?*_checkpoint_?*.node | ||
rm -f $(FLMLMODEL)_?*_?*_checkpoint.pvtu $(FLMLMODEL)_?*_?*_checkpoint.vtu | ||
rm -f $(FLMLMODEL)_?*_checkpoint.ele $(FLMLMODEL)_?*_checkpoint.edge $(FLMLMODEL)_?*_checkpoint.node | ||
rm -f $(FLMLMODEL)_?*_checkpoint.vtu | ||
rm -rf $(FLMLMODEL)_?* | ||
clean-run-debug: clean-run | ||
rm -f adapted_mesh_?*.vtu bounding_box_?*_?*.vtu final_metric_?*.vtu gmon.out gradation_metric_?*.vtu interpolation_metric_final_?*.vtu interpolation_metric_hessian_?*_?*.vtu interpolation_metric_merge_?*_?*.vtu interpolation_metric_metric_?*_?*.vtu metric_input_?*_?*.vtu | ||
rm -f adapted_mesh.edge adapted_mesh.ele adapted_mesh.node | ||
rm -f adapted_mesh_?*.edge adapted_mesh_?*.ele adapted_mesh_?*.node | ||
rm -f adapted_state_?*.pvtu adapted_state_?*.vtu |
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<?xml version='1.0' encoding='utf-8'?> | ||
<fluidity_options> | ||
<simulation_name> | ||
<string_value lines="1">empty_partitions</string_value> | ||
</simulation_name> | ||
<problem_type> | ||
<string_value lines="1">fluids</string_value> | ||
</problem_type> | ||
<geometry> | ||
<dimension> | ||
<integer_value rank="0">2</integer_value> | ||
</dimension> | ||
<mesh name="CoordinateMesh"> | ||
<from_file file_name="square"> | ||
<format name="gmsh"/> | ||
<stat> | ||
<include_in_stat/> | ||
</stat> | ||
</from_file> | ||
</mesh> | ||
<mesh name="P0"> | ||
<from_mesh> | ||
<mesh name="CoordinateMesh"/> | ||
<mesh_shape> | ||
<polynomial_degree> | ||
<integer_value rank="0">0</integer_value> | ||
</polynomial_degree> | ||
</mesh_shape> | ||
<mesh_continuity> | ||
<string_value>discontinuous</string_value> | ||
</mesh_continuity> | ||
<stat> | ||
<exclude_from_stat/> | ||
</stat> | ||
</from_mesh> | ||
</mesh> | ||
<quadrature> | ||
<degree> | ||
<integer_value rank="0">5</integer_value> | ||
</degree> | ||
</quadrature> | ||
</geometry> | ||
<io> | ||
<dump_format> | ||
<string_value>vtk</string_value> | ||
</dump_format> | ||
<dump_period> | ||
<constant> | ||
<real_value rank="0">0</real_value> | ||
</constant> | ||
</dump_period> | ||
<output_mesh name="CoordinateMesh"/> | ||
<checkpointing> | ||
<checkpoint_period_in_dumps> | ||
<integer_value rank="0">2</integer_value> | ||
</checkpoint_period_in_dumps> | ||
</checkpointing> | ||
<stat/> | ||
</io> | ||
<timestepping> | ||
<current_time> | ||
<real_value rank="0">0.0</real_value> | ||
</current_time> | ||
<timestep> | ||
<real_value rank="0">1.0</real_value> | ||
</timestep> | ||
<finish_time> | ||
<real_value rank="0">4.0</real_value> | ||
</finish_time> | ||
</timestepping> | ||
<material_phase name="Fluid"> | ||
<equation_of_state> | ||
<fluids> | ||
<linear> | ||
<reference_density> | ||
<real_value rank="0">1.0</real_value> | ||
</reference_density> | ||
</linear> | ||
</fluids> | ||
</equation_of_state> | ||
<scalar_field name="Pressure" rank="0"> | ||
<prognostic> | ||
<mesh name="CoordinateMesh"/> | ||
<spatial_discretisation> | ||
<continuous_galerkin/> | ||
</spatial_discretisation> | ||
<scheme> | ||
<poisson_pressure_solution> | ||
<string_value lines="1">only first timestep</string_value> | ||
</poisson_pressure_solution> | ||
<use_projection_method/> | ||
</scheme> | ||
<solver> | ||
<iterative_method name="cg"/> | ||
<preconditioner name="sor"/> | ||
<relative_error> | ||
<real_value rank="0">1.0e-7</real_value> | ||
</relative_error> | ||
<max_iterations> | ||
<integer_value rank="0">1000</integer_value> | ||
</max_iterations> | ||
<never_ignore_solver_failures/> | ||
<diagnostics> | ||
<monitors/> | ||
</diagnostics> | ||
</solver> | ||
<output/> | ||
<stat/> | ||
<convergence> | ||
<include_in_convergence/> | ||
</convergence> | ||
<detectors> | ||
<exclude_from_detectors/> | ||
</detectors> | ||
<steady_state> | ||
<include_in_steady_state/> | ||
</steady_state> | ||
<no_interpolation/> | ||
</prognostic> | ||
</scalar_field> | ||
<scalar_field name="Density" rank="0"> | ||
<diagnostic> | ||
<algorithm name="Internal" material_phase_support="multiple"/> | ||
<mesh name="CoordinateMesh"/> | ||
<output/> | ||
<stat/> | ||
<convergence> | ||
<include_in_convergence/> | ||
</convergence> | ||
<detectors> | ||
<include_in_detectors/> | ||
</detectors> | ||
<steady_state> | ||
<include_in_steady_state/> | ||
</steady_state> | ||
</diagnostic> | ||
</scalar_field> | ||
<vector_field name="Velocity" rank="1"> | ||
<prognostic> | ||
<mesh name="CoordinateMesh"/> | ||
<equation name="Boussinesq"/> | ||
<spatial_discretisation> | ||
<continuous_galerkin> | ||
<stabilisation> | ||
<no_stabilisation/> | ||
</stabilisation> | ||
<mass_terms> | ||
<lump_mass_matrix/> | ||
</mass_terms> | ||
<advection_terms/> | ||
<stress_terms> | ||
<tensor_form/> | ||
</stress_terms> | ||
<buoyancy/> | ||
</continuous_galerkin> | ||
<conservative_advection> | ||
<real_value rank="0">1.0</real_value> | ||
</conservative_advection> | ||
</spatial_discretisation> | ||
<temporal_discretisation> | ||
<theta> | ||
<real_value rank="0">0.0</real_value> | ||
</theta> | ||
<relaxation> | ||
<real_value rank="0">1.0</real_value> | ||
</relaxation> | ||
</temporal_discretisation> | ||
<solver> | ||
<iterative_method name="gmres"/> | ||
<preconditioner name="sor"/> | ||
<relative_error> | ||
<real_value rank="0">1.0e-7</real_value> | ||
</relative_error> | ||
<max_iterations> | ||
<integer_value rank="0">1000</integer_value> | ||
</max_iterations> | ||
<never_ignore_solver_failures/> | ||
<diagnostics> | ||
<monitors/> | ||
</diagnostics> | ||
</solver> | ||
<initial_condition name="WholeMesh"> | ||
<constant> | ||
<real_value shape="2" dim1="dim" rank="1">0 0</real_value> | ||
</constant> | ||
</initial_condition> | ||
<output/> | ||
<stat> | ||
<include_in_stat/> | ||
<previous_time_step> | ||
<exclude_from_stat/> | ||
</previous_time_step> | ||
<nonlinear_field> | ||
<exclude_from_stat/> | ||
</nonlinear_field> | ||
</stat> | ||
<convergence> | ||
<include_in_convergence/> | ||
</convergence> | ||
<detectors> | ||
<include_in_detectors/> | ||
</detectors> | ||
<steady_state> | ||
<include_in_steady_state/> | ||
</steady_state> | ||
<consistent_interpolation/> | ||
</prognostic> | ||
</vector_field> | ||
<scalar_field name="NodeOwner" rank="0"> | ||
<diagnostic> | ||
<algorithm legacy="true" name="Internal" material_phase_support="multiple"/> | ||
<mesh name="CoordinateMesh"/> | ||
<output/> | ||
<stat/> | ||
<convergence> | ||
<include_in_convergence/> | ||
</convergence> | ||
<detectors> | ||
<include_in_detectors/> | ||
</detectors> | ||
<steady_state> | ||
<include_in_steady_state/> | ||
</steady_state> | ||
</diagnostic> | ||
</scalar_field> | ||
</material_phase> | ||
<mesh_adaptivity> | ||
<hr_adaptivity> | ||
<period_in_timesteps> | ||
<integer_value rank="0">1</integer_value> | ||
</period_in_timesteps> | ||
<maximum_number_of_nodes> | ||
<integer_value rank="0">1000000</integer_value> | ||
</maximum_number_of_nodes> | ||
<enable_gradation/> | ||
<tensor_field name="MinimumEdgeLengths"> | ||
<anisotropic_symmetric> | ||
<python> | ||
<string_value lines="20" type="code" language="python">def val(X,t): | ||
a = 1.0/max(1.0,0.5*t*t) | ||
return [[a,0],[0,a]]</string_value> | ||
</python> | ||
</anisotropic_symmetric> | ||
</tensor_field> | ||
<tensor_field name="MaximumEdgeLengths"> | ||
<anisotropic_symmetric> | ||
<python> | ||
<string_value lines="20" type="code" language="python">def val(X,t): | ||
a = 1.0/max(1.0,0.5*t*t) | ||
return [[a,0],[0,a]]</string_value> | ||
</python> | ||
</anisotropic_symmetric> | ||
</tensor_field> | ||
</hr_adaptivity> | ||
</mesh_adaptivity> | ||
</fluidity_options> |
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<header> | ||
<constant name="FluidityVersion" type="string" value="allow_empty_partitions:6057376d68b9850eabb07d70ed2f24385c822e3c" /> | ||
<constant name="CompileTime" type="string" value="Aug 9 2017 14:02:17" /> | ||
<constant name="StartTime" type="string" value="20170811 173340.294+0100" /> | ||
<constant name="HostName" type="string" value="Unknown" /> | ||
<constant name="format" type="string" value="plain_text" /> | ||
<field column="1" name="ElapsedTime" statistic="value"/> | ||
<field column="2" name="dt" statistic="value"/> | ||
<field column="3" name="ElapsedWallTime" statistic="value"/> | ||
<field column="4" name="CoordinateMesh" statistic="nodes"/> | ||
<field column="5" name="CoordinateMesh" statistic="elements"/> | ||
<field column="6" name="CoordinateMesh" statistic="surface_elements"/> | ||
<field column="7" name="TotalMemory" statistic="current" material_phase="Memory"/> | ||
<field column="8" name="TotalMemory" statistic="min" material_phase="Memory"/> | ||
<field column="9" name="TotalMemory" statistic="max" material_phase="Memory"/> | ||
<field column="10" name="MeshMemory" statistic="current" material_phase="Memory"/> | ||
<field column="11" name="MeshMemory" statistic="min" material_phase="Memory"/> | ||
<field column="12" name="MeshMemory" statistic="max" material_phase="Memory"/> | ||
<field column="13" name="ScalarFieldMemory" statistic="current" material_phase="Memory"/> | ||
<field column="14" name="ScalarFieldMemory" statistic="min" material_phase="Memory"/> | ||
<field column="15" name="ScalarFieldMemory" statistic="max" material_phase="Memory"/> | ||
<field column="16" name="VectorFieldMemory" statistic="current" material_phase="Memory"/> | ||
<field column="17" name="VectorFieldMemory" statistic="min" material_phase="Memory"/> | ||
<field column="18" name="VectorFieldMemory" statistic="max" material_phase="Memory"/> | ||
<field column="19" name="TensorFieldMemory" statistic="current" material_phase="Memory"/> | ||
<field column="20" name="TensorFieldMemory" statistic="min" material_phase="Memory"/> | ||
<field column="21" name="TensorFieldMemory" statistic="max" material_phase="Memory"/> | ||
<field column="22" name="MatrixSparsityMemory" statistic="current" material_phase="Memory"/> | ||
<field column="23" name="MatrixSparsityMemory" statistic="min" material_phase="Memory"/> | ||
<field column="24" name="MatrixSparsityMemory" statistic="max" material_phase="Memory"/> | ||
<field column="25" name="MatrixMemory" statistic="current" material_phase="Memory"/> | ||
<field column="26" name="MatrixMemory" statistic="min" material_phase="Memory"/> | ||
<field column="27" name="MatrixMemory" statistic="max" material_phase="Memory"/> | ||
<field column="28" name="TransformCacheMemory" statistic="current" material_phase="Memory"/> | ||
<field column="29" name="TransformCacheMemory" statistic="min" material_phase="Memory"/> | ||
<field column="30" name="TransformCacheMemory" statistic="max" material_phase="Memory"/> | ||
<field column="31" name="Pressure" statistic="min" material_phase="Fluid"/> | ||
<field column="32" name="Pressure" statistic="max" material_phase="Fluid"/> | ||
<field column="33" name="Pressure" statistic="l2norm" material_phase="Fluid"/> | ||
<field column="34" name="Pressure" statistic="integral" material_phase="Fluid"/> | ||
<field column="35" name="Density" statistic="min" material_phase="Fluid"/> | ||
<field column="36" name="Density" statistic="max" material_phase="Fluid"/> | ||
<field column="37" name="Density" statistic="l2norm" material_phase="Fluid"/> | ||
<field column="38" name="Density" statistic="integral" material_phase="Fluid"/> | ||
<field column="39" name="NodeOwner" statistic="min" material_phase="Fluid"/> | ||
<field column="40" name="NodeOwner" statistic="max" material_phase="Fluid"/> | ||
<field column="41" name="NodeOwner" statistic="l2norm" material_phase="Fluid"/> | ||
<field column="42" name="NodeOwner" statistic="integral" material_phase="Fluid"/> | ||
<field column="43" name="Velocity%magnitude" statistic="min" material_phase="Fluid"/> | ||
<field column="44" name="Velocity%magnitude" statistic="max" material_phase="Fluid"/> | ||
<field column="45" name="Velocity%magnitude" statistic="l2norm" material_phase="Fluid"/> | ||
<field column="46" name="Velocity%1" statistic="min" material_phase="Fluid"/> | ||
<field column="47" name="Velocity%1" statistic="max" material_phase="Fluid"/> | ||
<field column="48" name="Velocity%1" statistic="l2norm" material_phase="Fluid"/> | ||
<field column="49" name="Velocity%1" statistic="integral" material_phase="Fluid"/> | ||
<field column="50" name="Velocity%2" statistic="min" material_phase="Fluid"/> | ||
<field column="51" name="Velocity%2" statistic="max" material_phase="Fluid"/> | ||
<field column="52" name="Velocity%2" statistic="l2norm" material_phase="Fluid"/> | ||
<field column="53" name="Velocity%2" statistic="integral" material_phase="Fluid"/> | ||
</header> | ||
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