fix: CQDG-526 families in specimen enricher #200
Workflow file for this run
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| name: create release | |
| on: | |
| push: | |
| tags: | |
| - 'v*' | |
| workflow_dispatch: | |
| inputs: | |
| logLevel: | |
| description: 'Log level' | |
| required: true | |
| default: 'warning' | |
| tags: | |
| required: false | |
| description: 'Create release' | |
| jobs: | |
| build: | |
| name: Create Release | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - uses: olafurpg/setup-scala@v11 | |
| - name: Configure Git user | |
| run: | | |
| git config user.email "no-mail" | |
| git config user.name "ig-deploy-bot" | |
| - name: Build Assembly | |
| run: sbt clean assembly | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| - name: Create Release | |
| id: create_release | |
| uses: actions/create-release@v1 | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| with: | |
| tag_name: ${{ github.ref }} | |
| release_name: Release ${{ github.ref }} | |
| draft: false | |
| prerelease: false | |
| - name: Upload Asset Import Task | |
| id: upload-asset-import-task | |
| uses: actions/[email protected] | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| with: | |
| upload_url: ${{ steps.create_release.outputs.upload_url }} | |
| asset_path: import-task/target/scala-2.12/import-task.jar | |
| asset_name: import-task.jar | |
| asset_content_type: application/java-archive | |
| - name: Upload Asset Index Task | |
| id: upload-asset-index-task | |
| uses: actions/[email protected] | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| with: | |
| upload_url: ${{ steps.create_release.outputs.upload_url }} | |
| asset_path: index-task/target/scala-2.12/index-task.jar | |
| asset_name: index-task.jar | |
| asset_content_type: application/java-archive | |
| - name: Upload Asset Prepare Index | |
| id: upload-asset-prepare-index | |
| uses: actions/[email protected] | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| with: | |
| upload_url: ${{ steps.create_release.outputs.upload_url }} | |
| asset_path: prepare-index/target/scala-2.12/prepare-index.jar | |
| asset_name: prepare-index.jar | |
| asset_content_type: application/java-archive | |
| - name: Upload Asset Publish Task | |
| id: upload-asset-publish-task | |
| uses: actions/[email protected] | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| with: | |
| upload_url: ${{ steps.create_release.outputs.upload_url }} | |
| asset_path: publish-task/target/scala-2.12/publish-task.jar | |
| asset_name: publish-task.jar | |
| asset_content_type: application/java-archive | |
| - name: Upload Variant Task | |
| id: upload-variant-task | |
| uses: actions/[email protected] | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| with: | |
| upload_url: ${{ steps.create_release.outputs.upload_url }} | |
| asset_path: variant-task/target/scala-2.12/variant-task.jar | |
| asset_name: variant-task.jar | |
| asset_content_type: application/java-archive | |
| - name: Publish Image using commit sha and timestamp | |
| id: publish-fharo-image | |
| uses: Ferlab-Ste-Justine/action-push-image@v2 | |
| with: | |
| username: ${{ secrets.FERLAB_DOCKER_HUB_USER }} | |
| password: ${{ secrets.FERLAB_DOCKER_HUB_TOKEN }} | |
| image: ferlabcrsj/fhavro-export | |
| tag_format: "{sha}-{timestamp}" | |
| location: fhavro-export | |
| dockerfile: fhavro-export/Dockerfile |