Clin 3527 test for broken link

.github/workflows/action.yml

@@ -0,0 +1,30 @@
+name: Linkspector
+on: [ pull_request ]
+jobs:
+  check-links:
+    name: runner / linkspector
+    runs-on: ubuntu-latest
+    steps:
+    - uses: actions/checkout@v4
+
+    # Step to set up Node.js environment
+    - name: Set up Node.js
+      uses: actions/setup-node@v3
+      with:
+        node-version: 'latest'
+
+    # Step to install Docsify CLI
+    - name: Install Docsify CLI
+      run: npm install -g docsify-cli@latest
+
+    # Step to start Docsify server
+    - name: Start Docsify server
+      run: docsify serve ./docs &
+
+    # Step to run Linkspector
+    - name: Run linkspector
+      uses: umbrelladocs/action-linkspector@v1
+      with:
+        reporter: github-pr-review
+        config_file: linkspector_config.yaml
+        fail_on_error: true

docs/_sidebar.md

@@ -1,7 +1,7 @@
 - Qlin Prescriptions
   - [Create a New Prescription](qlin_prescriptions/create_prescription.md)
   - [My prescriptions](qlin_prescriptions/my_prescription.md)
-- Qlin Genetics
+- [Qlin Genetics](qlin_genetic/home.md)
   - [Prescriptions](qlin_genetic/prescription/landing.md)
     - [Details](qlin_genetic/prescription/details.md)
     - [Variants](qlin_genetic/prescription/variants.md)

docs/docs-fr/_sidebar.md

@@ -1,7 +1,7 @@
 - Qlin Prescriptions
   - [Créer une nouvelle prescription](fr/qlin_prescriptions/create_prescription.md)
   - [Mes prescriptions](fr/qlin_prescriptions/my_prescription.md)
-- Qlin Génétique
+- [Qlin Génétique](fr/qlin_genetic/home.md)
   - [Prescriptions](fr/qlin_genetic/prescription/landing.md)
     - [Détails](fr/qlin_genetic/prescription/details.md)
     - [Contrôle qualité](fr/qlin_genetic/prescription/qc.md)

docs/docs-fr/qlin_genetic/exploration.md

@@ -2,4 +2,4 @@
 
 La section **Exploration** permet de consulter l'entièreté des variants génétiques SNV présents dans Qlin Génétique.
 
-L'utilisation du [gestionnaire de filtres](/fr/qlin_genetic/_filter_manager/filter_manager.md) et du [panneau latéral de filtres](/fr/qlin_genetic/filter_panel/filter_panel.md) facilite la visualisation des variants SNV dans le [tableau](/fr/qlin_genetic/tables/tables.md).
+L'utilisation du [gestionnaire de filtres](/fr/qlin_genetic/filters_manager/filters_manager.md) et du [panneau latéral de filtres](/fr/qlin_genetic/filter_panel/filter_panel.md) facilite la visualisation des variants SNV dans le [tableau](/fr/qlin_genetic/tables/tables.md).

docs/docs-fr/qlin_genetic/home.md

@@ -2,5 +2,5 @@
 
 La page d'accueil vous permet de rechercher :
 
-- une [prescription](fr/prescription/details.md) par numéro de prescription, requête, échantillon, dossier, numéro de patient et numéro de lot
+- une [prescription](fr/qlin_genetic/prescription/details.md) par numéro de prescription, requête, échantillon, dossier, numéro de patient et numéro de lot
 - un [variant](fr/qlin_genetic/exploration.md) par locus, dbSNP, ClinVar

docs/qlin_genetic/archives.md

@@ -1,3 +1,3 @@
 # Archives
 
-The **Archives** section allows the search for [files of a prescription](prescription/files.md) by request ID or patient ID.
+The **Archives** section allows the search for [files of a prescription](qlin_genetic/prescription/files.md) by request ID or patient ID.

docs/qlin_genetic/exploration.md

@@ -2,4 +2,4 @@
 
 The **Exploration** section allows you to view all the SNV genetic variants present in Qlin Genetics.
 
-The use of the [filter manager](_filter_manager/filter_manager.md) and the [filter sidebar](filter_panel/filter_panel.md) facilitates the visualization of SNV variants in the [table](tables/tables.md).
+The use of the [filter manager](qlin_genetic/filters_manager/filters_manager.md) and the [filter sidebar](filter_panel/filter_panel.md) facilitates the visualization of SNV variants in the [table](tables/tables.md).

docs/qlin_genetic/home.md

@@ -2,5 +2,5 @@
 
 The homepage allows you to search:
 
-- a [prescription](prescription/details.md) by prescription, requisition, sample, medical record number, patient number and run number
-- a [variant](qlin_genetic/exploration.md) by locus, dbSNP, ClinVar
+- a [prescription](qlin_genetic/prescription/details.md) by prescription, requisition, sample, medical record number, patient number and run number
+- a [variant](qlin_genetic/exploration.md) by locus, dbSNP, ClinVar

linkspector_config.yaml

@@ -0,0 +1,14 @@
+dirs:
+- docs
+useGitIgnore: true
+replacementPatterns:
+- pattern: "(fr/)(.*)(?<!https://raw.githubusercontent.com.*)"
+  replacement: '$2'
+baseUrl: http://localhost:3000
+excludedFiles:
+- ./docs/qlin_genetic/home.md
+- ./docs/qlin_genetic/archives.md
+- ./docs/qlin_genetic/exploration.md
+- ./docs/docs-fr/qlin_genetic/home.md
+- ./docs/docs-fr/qlin_genetic/exploration.md
+- ./docs/docs-fr/qlin_genetic/archives.md

readme.md

@@ -25,6 +25,16 @@ https://docsify.js.org/#/quickstart
 docsify serve docs
 ```
 
+### Broken hyperlinks test
+
+[Start locally](#to-start-locally) then run linkspector
+
+```
+linkspector check -c linkspector_config.yaml
+```
+
+https://github.com/UmbrellaDocs/linkspector
+
 #### To start in Docker
 ```
 docker-compose up
@@ -35,5 +45,3 @@ docker-compose up
 Issue with images and alias (fr)
 It works when viewing the .md file but not when served by Docsify
 https://github.com/docsifyjs/docsify/issues/1891
-If not fix an alternative could be to host the images in a CND or straight on github by putting the repo public
-https://stackoverflow.com/questions/61537403/how-to-host-image-at-https-user-images-githubusercontent-com-path-filename