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RMBase fix

RMBase fix #16

Triggered via pull request March 24, 2024 00:23
Status Success
Total duration 22m 22s
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check-bioc-devel.yml

on: pull_request
Matrix: build-check
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25 warnings
ubuntu-latest (devel)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/cache@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
windows-latest (devel)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/cache@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
windows-latest (devel)
replacing previous import 'GenomicFeatures::makeTxDbPackage' by 'txdbmaker::makeTxDbPackage' when loading 'EpiTxDb'
windows-latest (devel)
replacing previous import 'GenomicFeatures::supportedUCSCFeatureDbTables' by 'txdbmaker::supportedUCSCFeatureDbTables' when loading 'EpiTxDb'
windows-latest (devel)
replacing previous import 'GenomicFeatures::makeTxDbFromGFF' by 'txdbmaker::makeTxDbFromGFF' when loading 'EpiTxDb'
windows-latest (devel)
replacing previous import 'GenomicFeatures::makeTxDbPackageFromBiomart' by 'txdbmaker::makeTxDbPackageFromBiomart' when loading 'EpiTxDb'
windows-latest (devel)
replacing previous import 'GenomicFeatures::supportedMiRBaseBuildValues' by 'txdbmaker::supportedMiRBaseBuildValues' when loading 'EpiTxDb'
windows-latest (devel)
replacing previous import 'GenomicFeatures::supportedUCSCFeatureDbTracks' by 'txdbmaker::supportedUCSCFeatureDbTracks' when loading 'EpiTxDb'
windows-latest (devel)
replacing previous import 'GenomicFeatures::browseUCSCtrack' by 'txdbmaker::browseUCSCtrack' when loading 'EpiTxDb'
windows-latest (devel)
replacing previous import 'GenomicFeatures::getChromInfoFromBiomart' by 'txdbmaker::getChromInfoFromBiomart' when loading 'EpiTxDb'
windows-latest (devel)
replacing previous import 'GenomicFeatures::makeTxDbFromGRanges' by 'txdbmaker::makeTxDbFromGRanges' when loading 'EpiTxDb'
windows-latest (devel)
replacing previous import 'GenomicFeatures::supportedUCSCtables' by 'txdbmaker::supportedUCSCtables' when loading 'EpiTxDb'
windows-latest (devel)
Found the following significant warnings:
macOS-latest (devel)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/cache@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
macOS-latest (devel)
replacing previous import ‘GenomicFeatures::makeTxDbPackage’ by ‘txdbmaker::makeTxDbPackage’ when loading ‘EpiTxDb’
macOS-latest (devel)
replacing previous import ‘GenomicFeatures::supportedUCSCFeatureDbTables’ by ‘txdbmaker::supportedUCSCFeatureDbTables’ when loading ‘EpiTxDb’
macOS-latest (devel)
replacing previous import ‘GenomicFeatures::makeTxDbFromGFF’ by ‘txdbmaker::makeTxDbFromGFF’ when loading ‘EpiTxDb’
macOS-latest (devel)
replacing previous import ‘GenomicFeatures::makeTxDbPackageFromBiomart’ by ‘txdbmaker::makeTxDbPackageFromBiomart’ when loading ‘EpiTxDb’
macOS-latest (devel)
replacing previous import ‘GenomicFeatures::supportedMiRBaseBuildValues’ by ‘txdbmaker::supportedMiRBaseBuildValues’ when loading ‘EpiTxDb’
macOS-latest (devel)
replacing previous import ‘GenomicFeatures::supportedUCSCFeatureDbTracks’ by ‘txdbmaker::supportedUCSCFeatureDbTracks’ when loading ‘EpiTxDb’
macOS-latest (devel)
replacing previous import ‘GenomicFeatures::browseUCSCtrack’ by ‘txdbmaker::browseUCSCtrack’ when loading ‘EpiTxDb’
macOS-latest (devel)
replacing previous import ‘GenomicFeatures::getChromInfoFromBiomart’ by ‘txdbmaker::getChromInfoFromBiomart’ when loading ‘EpiTxDb’
macOS-latest (devel)
replacing previous import ‘GenomicFeatures::makeTxDbFromGRanges’ by ‘txdbmaker::makeTxDbFromGRanges’ when loading ‘EpiTxDb’
macOS-latest (devel)
replacing previous import ‘GenomicFeatures::supportedUCSCtables’ by ‘txdbmaker::supportedUCSCtables’ when loading ‘EpiTxDb’
macOS-latest (devel)
Found the following significant warnings: