doc: wording on drag/drop nifti #1274
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| name: '[docker image]' | |
| on: | |
| push: | |
| branches: | |
| - "master" | |
| - "staging" | |
| # do not rebuild if... | |
| paths-ignore: | |
| # changes to .openshift directory... mostly devops config | |
| - '.openshift/*' | |
| # docs (docs are built on readthedocs any way) | |
| - 'docs/**/*' | |
| jobs: | |
| set-vars: | |
| runs-on: ubuntu-latest | |
| outputs: | |
| GIT_DIGEST: ${{ steps.set-vars-step.outputs.GIT_DIGEST }} | |
| BRANCH_NAME: ${{ steps.set-vars-step.outputs.BRANCH_NAME }} | |
| BUILD_TEXT: ${{ steps.set-vars-step.outputs.BUILD_TEXT }} | |
| DEPLOY_ID: ${{ steps.set-vars-step.outputs.DEPLOY_ID }} | |
| SXPLR_VERSION: ${{ steps.set-vars-step.outputs.SXPLR_VERSION }} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - id: 'set-vars-step' | |
| name: Set variables | |
| run: | | |
| GIT_DIGEST=${{ github.sha }} | |
| echo "Git digest: $GIT_DIGEST" | |
| GIT_DIGEST=$(echo $GIT_DIGEST | grep -oP '^.{6}') | |
| echo "Using first 6 chars of hash: $GIT_DIGEST" | |
| echo "GIT_DIGEST=$GIT_DIGEST" >> $GITHUB_OUTPUT | |
| echo "Using github.ref: $GITHUB_REF" | |
| BRANCH_NAME=${GITHUB_REF#refs/heads/} | |
| echo "BRANCH_NAME=$BRANCH_NAME" >> $GITHUB_OUTPUT | |
| echo "Branch is $BRANCH_NAME ." | |
| if [[ "$BRANCH_NAME" == 'master' ]] | |
| then | |
| echo "BUILD_TEXT=" >> $GITHUB_OUTPUT | |
| else | |
| echo "BUILD_TEXT=$BRANCH_NAME" >> $GITHUB_OUTPUT | |
| fi | |
| # DEPLOY_ID == remove _ / and lowercase everything from branch | |
| DEPLOY_ID=$(echo ${BRANCH_NAME//[_\/]/} | awk '{ print tolower($0) }') | |
| echo "DEPLOY_ID=$DEPLOY_ID" >> $GITHUB_OUTPUT | |
| SXPLR_VERSION=$(jq -r '.version' package.json) | |
| echo "SXPLR_VERSION=$SXPLR_VERSION" | |
| echo "SXPLR_VERSION=$SXPLR_VERSION" >> $GITHUB_OUTPUT | |
| build-docker-img: | |
| runs-on: ubuntu-latest | |
| needs: | |
| - set-vars | |
| env: | |
| MATOMO_ID_PROD: '12' | |
| MATOMO_URL_PROD: 'https://stats.humanbrainproject.eu/' | |
| PRODUCTION: 'true' | |
| DOCKER_REGISTRY: 'docker-registry.ebrains.eu/siibra/' | |
| SIIBRA_API_STABLE: 'https://siibra-api-stable.apps.hbp.eu/v3_0,https://siibra-api-prod.apps.tc.humanbrainproject.eu/v3_0' | |
| SIIBRA_API_RC: 'https://siibra-api-rc.apps.hbp.eu/v3_0' | |
| SIIBRA_API_LATEST: 'https://siibra-api-latest.apps-dev.hbp.eu/v3_0' | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| lfs: true | |
| - name: 'Set matomo env var' | |
| run: | | |
| echo "Using github.ref: $GITHUB_REF" | |
| echo "BRANCH_NAME=${GITHUB_REF#refs/heads/}" >> $GITHUB_ENV | |
| echo "MATOMO_URL=${{ env.MATOMO_URL_PROD }}" >> $GITHUB_ENV | |
| echo "MATOMO_ID=${{ env.MATOMO_ID_PROD }}" >> $GITHUB_ENV | |
| if [[ "$GITHUB_REF" == 'refs/heads/master' ]] | |
| then | |
| echo "Either master, using prod env..." | |
| echo "SIIBRA_API_ENDPOINTS=${{ env.SIIBRA_API_STABLE }}" >> $GITHUB_ENV | |
| elif [[ "$GITHUB_REF" == 'refs/heads/staging' ]] | |
| then | |
| echo "Either staging, using staging env..." | |
| echo "SIIBRA_API_ENDPOINTS=${{ env.SIIBRA_API_RC }}" >> $GITHUB_ENV | |
| else | |
| echo "Currently, only master and staging are built" | |
| exit 1 | |
| fi | |
| - name: 'Set version variable & expmt feature flag' | |
| run: | | |
| if [[ "$GITHUB_REF" == 'refs/heads/master' ]] || [[ "$GITHUB_REF" == 'refs/heads/staging' ]] | |
| then | |
| echo "prod/staging build, do not enable experimental features" | |
| else | |
| echo "dev bulid, enable experimental features" | |
| fi | |
| - id: 'build-docker-image' | |
| name: 'Build docker image' | |
| run: | | |
| GIT_DIGEST=${{ needs.set-vars.outputs.GIT_DIGEST }} | |
| echo "Git digest: $GIT_DIGEST" | |
| DOCKER_BUILT_TAG=${{ env.DOCKER_REGISTRY }}siibra-explorer:$BRANCH_NAME | |
| echo "Building $DOCKER_BUILT_TAG" | |
| docker build \ | |
| --build-arg BUILD_HASH=$GIT_DIGEST \ | |
| --build-arg MATOMO_URL=$MATOMO_URL \ | |
| --build-arg MATOMO_ID=$MATOMO_ID \ | |
| --build-arg SIIBRA_API_ENDPOINTS=$SIIBRA_API_ENDPOINTS \ | |
| --build-arg EXPERIMENTAL_FEATURE_FLAG=$EXPERIMENTAL_FEATURE_FLAG \ | |
| -t $DOCKER_BUILT_TAG \ | |
| . | |
| echo "Successfully built $DOCKER_BUILT_TAG" | |
| echo "DOCKER_BUILT_TAG=$DOCKER_BUILT_TAG" >> $GITHUB_ENV | |
| inspect_str=$(docker image inspect --format='json' $DOCKER_BUILT_TAG) | |
| echo "Inspected tag: $inspect_str" | |
| - name: 'Push to docker registry' | |
| run: | | |
| echo "Login to docker registry" | |
| docker login \ | |
| -u '${{ secrets.EBRAINS_DOCKER_REG_USER }}' \ | |
| -p '${{ secrets.EBRAINS_DOCKER_REG_TOKEN }}' \ | |
| docker-registry.ebrains.eu | |
| echo "Pushing $DOCKER_BUILT_TAG" | |
| docker push $DOCKER_BUILT_TAG | |
| - name: 'If master, also tag as per package.json' | |
| if: ${{ github.ref == 'refs/heads/master' }} | |
| run: | | |
| VERSION=$(jq -r '.version' package.json) | |
| VERSIONED_DOCKER_BUILT_TAG=${{ env.DOCKER_REGISTRY }}siibra-explorer:$VERSION | |
| docker tag $DOCKER_BUILT_TAG $VERSIONED_DOCKER_BUILT_TAG | |
| docker push $VERSIONED_DOCKER_BUILT_TAG | |
| trigger-deploy-rc-rancher: | |
| if: ${{ needs.set-vars.outputs.BRANCH_NAME == 'staging' && success() }} | |
| needs: | |
| - build-docker-img | |
| - set-vars | |
| uses: ./.github/workflows/deploy-helm.yml | |
| with: | |
| DEPLOYMENT_NAME: rc | |
| IMAGE_TAG: staging | |
| # GIT_DIGEST may (sometimes) be all numbers. prepend 'h' to cast to str | |
| IMAGE_DIGEST: h${{ needs.set-vars.outputs.GIT_DIGEST }} | |
| secrets: | |
| KUBECONFIG: ${{ secrets.KUBECONFIG }} | |
| cypress-staging-viewer: | |
| needs: | |
| - trigger-deploy-rc-rancher | |
| - set-vars | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: | |
| - ubuntu-latest | |
| # - windows-latest | |
| - macos-latest | |
| viewer: | |
| - ng | |
| - fsa | |
| browser: | |
| - chrome | |
| - webkit | |
| include: | |
| - viewer: ng | |
| saneurl: human | |
| - viewer: fsa | |
| saneurl: fsaverage | |
| exclude: | |
| - os: ubuntu-latest | |
| browser: webkit | |
| # - os: windows-latest | |
| # browser: webkit | |
| uses: ./.github/workflows/_screenshot.yml | |
| with: | |
| url: https://atlases.ebrains.eu/viewer-staging/go/${{ matrix.saneurl }} | |
| screenshot-filename: ${{ needs.set-vars.outputs.GIT_DIGEST }}/viewer-preview/${{ matrix.viewer }}_${{ matrix.os }}_${{ matrix.browser }} | |
| secrets: | |
| client-id: ${{ secrets.EBRAINS_SIIBRA_EXPLORER_OIDC_CLIENTID}} | |
| client-secret: ${{ secrets.EBRAINS_SIIBRA_EXPLORER_OIDC_CLIENTSECRET}} | |
| cypress-staging-url: | |
| needs: | |
| - trigger-deploy-rc-rancher | |
| - set-vars | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| saneurl: | |
| - siibra_paper_2023_2A | |
| - siibra_paper_2023_2B | |
| - siibra_paper_2023_2C | |
| - siibra_paper_2023_2D | |
| - siibra_paper_2023_2E | |
| - siibra_paper_2023_2F | |
| uses: ./.github/workflows/_screenshot.yml | |
| with: | |
| url: https://atlases.ebrains.eu/viewer-staging/go/${{ matrix.saneurl }} | |
| screenshot-filename: ${{ needs.set-vars.outputs.GIT_DIGEST }}/url-preview/${{ matrix.saneurl }} | |
| secrets: | |
| client-id: ${{ secrets.EBRAINS_SIIBRA_EXPLORER_OIDC_CLIENTID}} | |
| client-secret: ${{ secrets.EBRAINS_SIIBRA_EXPLORER_OIDC_CLIENTSECRET}} | |
| trigger-deploy-expmt-rancher: | |
| if: ${{ needs.set-vars.outputs.BRANCH_NAME == 'staging' && success() }} | |
| needs: | |
| - build-docker-img | |
| - set-vars | |
| uses: ./.github/workflows/deploy-helm.yml | |
| with: | |
| DEPLOYMENT_NAME: expmt | |
| IMAGE_TAG: staging | |
| # GIT_DIGEST may (sometimes) be all numbers. prepend 'h' to cast to str | |
| IMAGE_DIGEST: h${{ needs.set-vars.outputs.GIT_DIGEST }} | |
| secrets: | |
| KUBECONFIG: ${{ secrets.KUBECONFIG }} | |
| trigger-deploy-master-rancher: | |
| if: ${{ needs.set-vars.outputs.BRANCH_NAME == 'master' && success() }} | |
| needs: | |
| - build-docker-img | |
| - set-vars | |
| uses: ./.github/workflows/deploy-helm.yml | |
| with: | |
| DEPLOYMENT_NAME: prod | |
| IMAGE_TAG: ${{ needs.set-vars.outputs.SXPLR_VERSION }} | |
| # GIT_DIGEST may (sometimes) be all numbers. prepend 'h' to cast to str | |
| IMAGE_DIGEST: h${{ needs.set-vars.outputs.GIT_DIGEST }} | |
| secrets: | |
| KUBECONFIG: ${{ secrets.KUBECONFIG }} |