Implement support for changing SHM_SIZE #243
Workflow file for this run
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| # Run nose tests and CUBE integration tests. | |
| # If both pass, build a multi-architectural docker image and push | |
| # it to Dockerhub. When the git ref is tagged, the docker image | |
| # will be tagged by the same name. | |
| name: ci | |
| on: | |
| push: | |
| branches: [ master ] | |
| tags: | |
| - 'v[0-9]+.[0-9]+.[0-9]+*' | |
| pull_request: | |
| branches: [ master ] | |
| jobs: | |
| test-python: | |
| name: unit tests | |
| runs-on: ubuntu-22.04 | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - uses: actions/setup-python@v4 | |
| with: | |
| python-version: '3.10' | |
| - name: Install | |
| run: | | |
| pip install -r requirements/local.txt | |
| pip install -e . | |
| - name: Pytest | |
| run: pytest --color=yes | |
| test-docker: | |
| name: tests (docker, podman) | |
| runs-on: ubuntu-22.04 | |
| strategy: | |
| matrix: | |
| engine: | |
| - docker | |
| - podman | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Test | |
| run: | | |
| # podman is not configured to allow the Github Actions user to set CPU limits, so we need to ignore them. | |
| # https://github.com/containers/podman/blob/main/troubleshooting.md#26-running-containers-with-resource-limits-fails-with-a-permissions-error | |
| if [ '${{ matrix.engine }}' = 'podman' ]; then | |
| export IGNORE_LIMITS=yes | |
| fi | |
| ./test_docker.sh '${{ matrix.engine }}' | |
| test-swarm: | |
| name: tests (swarm) | |
| runs-on: ubuntu-22.04 | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - run: ./test_swarm.sh | |
| test-cube: | |
| name: tests (integration) | |
| runs-on: ubuntu-22.04 | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - run: docker build -t fnndsc/pman . | |
| - uses: FNNDSC/cube-integration-action@master | |
| build: | |
| needs: [test-python, test-docker, test-swarm, test-cube] | |
| if: github.event_name == 'push' || github.event_name == 'release' | |
| runs-on: ubuntu-22.04 | |
| steps: | |
| - uses: actions/checkout@v3 | |
| with: | |
| fetch-depth: "0" | |
| - name: Get build version | |
| id: version | |
| run: | | |
| desc="$(git describe --tags)" | |
| echo "Version=$desc" | |
| echo "desc=$desc" >> $GITHUB_OUTPUT | |
| - name: Get build tags | |
| id: info | |
| shell: python | |
| run: | | |
| import os | |
| import datetime | |
| import itertools | |
| import subprocess as sp | |
| short_sha = os.getenv('GITHUB_SHA', 'unknown')[:7] | |
| git_refs = [] | |
| if os.getenv('GITHUB_REF', '').startswith('refs/tags/v'): | |
| version_from_tag = os.getenv('GITHUB_REF')[11:] | |
| git_refs.append(version_from_tag.replace('+', '.')) | |
| registries = ['docker.io', 'ghcr.io'] | |
| repo = os.environ['GITHUB_REPOSITORY'].lower() | |
| tags = ['latest'] + git_refs | |
| names = ','.join(''.join(c) for c in itertools.product( | |
| (r + '/' for r in registries), | |
| [repo], | |
| (':' + t for t in tags) | |
| )) | |
| with open(os.getenv('GITHUB_OUTPUT'), 'a') as f: | |
| f.write(f'tags={names}\n') | |
| - uses: docker/setup-qemu-action@v2 | |
| - uses: docker/setup-buildx-action@v2 | |
| id: buildx | |
| - name: Cache Docker layers | |
| uses: actions/cache@v2 | |
| with: | |
| path: /tmp/.buildx-cache | |
| key: ${{ runner.os }}-buildx-${{ github.sha }} | |
| restore-keys: | | |
| ${{ runner.os }}-buildx- | |
| - name: Login to DockerHub | |
| uses: docker/login-action@v2 | |
| with: | |
| username: ${{ secrets.DOCKERHUB_USERNAME }} | |
| password: ${{ secrets.DOCKERHUB_PASSWORD }} | |
| - name: Login to GitHub Container Registry | |
| uses: docker/login-action@v2 | |
| with: | |
| registry: ghcr.io | |
| username: ${{ github.repository_owner }} | |
| password: ${{ secrets.GITHUB_TOKEN }} | |
| - name: Build and push | |
| uses: docker/build-push-action@v3 | |
| with: | |
| build-args: | | |
| ENVIRONMENT=production | |
| BUILD_VERSION=${{ steps.version.outputs.desc }} | |
| push: true | |
| context: . | |
| file: ./Dockerfile | |
| tags: "${{ steps.info.outputs.tags }}" | |
| platforms: linux/amd64,linux/ppc64le,linux/arm64 | |
| cache-from: type=local,src=/tmp/.buildx-cache | |
| cache-to: type=local,dest=/tmp/.buildx-cache | |
| - name: Update Docker Hub description | |
| uses: peter-evans/dockerhub-description@v2 | |
| with: | |
| username: ${{ secrets.DOCKERHUB_USERNAME }} | |
| password: ${{ secrets.DOCKERHUB_PASSWORD }} | |
| short-description: ChRIS compute resource job dispatcher | |
| readme-filepath: ./README.md | |
| repository: fnndsc/pman |