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Fix pyserde dependency #20

Fix pyserde dependency

Fix pyserde dependency #20

Workflow file for this run

name: Publish
on:
push:
tags:
- "v?[0-9]+.[0-9]+.[0-9]+*"
env:
logo: https://github.com/FNNDSC/cube-design/blob/master/_common-assets/ChRISlogo-color.svg.png?raw=true
jobs:
release:
name: Release
runs-on: ubuntu-latest
env:
POETRY_VERSION: '1.5.1'
steps:
- uses: actions/checkout@v4
- uses: actions/setup-python@v4
with:
python-version: '3.10'
# https://github.com/snok/install-poetry#caching-the-poetry-installation
- name: Load cached poetry installation
id: cached-poetry
uses: actions/cache@v3
with:
path: ~/.local
key: poetry-${{ env.POETRY_VERSION }}-0 # increment to reset cache
- name: Install Python Poetry
if: steps.cached-poetry.outputs.cache-hit != 'true'
uses: snok/install-poetry@c9e8b50048357a728ac0409bae3d7c0a1685118a
with:
version: ${{ env.POETRY_VERSION }}
- name: Install
run: poetry install --all-extras
- name: Publish
run: poetry publish --build --username='__token__' --password='${{ secrets.PYPI_API_TOKEN }}'
- name: pdoc
run: |
poetry install --with=doc
poetry run pdoc \
--logo '${{ env.logo }}' \
--footer-text='Version ${{ github.ref_name }}' \
--docformat numpy \
aiochris -o pdoc
- name: Deploy docs (version)
uses: JamesIves/[email protected]
with:
branch: gh-pages
folder: pdoc
clean: true
clean-exclude: 'v*.*.*/'
target-folder: "${{ github.ref_name }}"
- name: Deploy docs (latest)
uses: JamesIves/[email protected]
with:
branch: gh-pages
folder: pdoc
clean: false
- name: Get version
id: info
run: echo "version=$(poetry version | awk '{print $2}')" >> "$GITHUB_OUTPUT"
- name: Create Dockerfile
run: |
set -ex
poetry build
cd dist
wheel=$(echo ./aiochris-${{ steps.info.outputs.version }}-py3-*.whl)
if ! [ -f "$wheel" ]; then
echo "::error ::Not a file: $wheel"
exit 1
fi
now=$(date --rfc-3339=seconds)
cat > Dockerfile << EOF
FROM docker.io/library/python:3.11.5-alpine
LABEL org.opencontainers.image.created="$now" \
org.opencontainers.image.authors="Jennings Zhang, FNNDSC <[email protected]>" \
org.opencontainers.image.url="${{ github.server_url }}/${{ github.repository }}" \
org.opencontainers.image.documentation="https://fnndsc.github.io/aiochris" \
org.opencontainers.image.source="${{ github.server_url }}/${{ github.repository }}" \
org.opencontainers.image.version="${{ steps.info.outputs.version }}" \
org.opencontainers.image.revision="${{ github.ref_name }}" \
org.opencontainers.image.licenses="MIT" \
org.opencontainers.image.title="aiochris Python package" \
org.opencontainers.image.description="Python async client library for ChRIS"
COPY $wheel /tmp/$wheel
RUN pip install --no-input --no-cache-dir --disable-pip-version-check '/tmp/$wheel' && rm -v '/tmp/$wheel'
EOF
cat Dockerfile
- name: Set up QEMU
uses: docker/setup-qemu-action@v3
- name: Set up Docker Buildx
uses: docker/setup-buildx-action@v3
- name: Login to GitHub Container Registry
uses: docker/login-action@v2
with:
registry: ghcr.io
username: ${{ github.repository_owner }}
password: ${{ secrets.GITHUB_TOKEN }}
- name: Build and push
uses: docker/build-push-action@v3
with:
push: true
context: ./dist
tags: |
ghcr.io/fnndsc/aiochris:${{ steps.info.outputs.version }}
ghcr.io/fnndsc/aiochris:latest
platforms: linux/amd64,linux/ppc64le,linux/arm64
cache-from: type=local,src=/tmp/.buildx-cache
cache-to: type=local,dest=/tmp/.buildx-cache
- name: Draft Github Release
uses: softprops/action-gh-release@v1
with:
draft: true
body: "https://${{ github.repository_owner }}.github.io/${{ github.event.repository.name }}/${{ github.ref_name }}"