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EvoArt committed Dec 13, 2021
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# PerMANOVA
# PERMANOVA

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PerMANOVA implementation based on the work of [McArdle and Anderson](https://esajournals.onlinelibrary.wiley.com/doi/10.1890/0012-9658%282001%29082%5B0290%3AFMMTCD%5D2.0.CO%3B2). This package aims to provide similar functionality to the `adonis2` in the R package [`vegan`](https://cran.r-project.org/web/packages/vegan/index.html). Thus, implementation details are more similar to `adonis2` than to the original work by McArdle and Anderson. P-values are calculated via permuting of data (not residuals) and calculating sequential sums of squares. In keeping with names from mythology, we provide an alias to the `permanova` function :`hydra` the many headed Lernaean Hydra represents the multivariate response data we aim to tackle here. Though perhaps Heracles or Iolis (the eventual slayers of the Hydra) would be more apt.
PERMANOVA implementation based on the work of [McArdle and Anderson](https://esajournals.onlinelibrary.wiley.com/doi/10.1890/0012-9658%282001%29082%5B0290%3AFMMTCD%5D2.0.CO%3B2). This package aims to provide similar functionality to the `adonis2` in the R package [`vegan`](https://cran.r-project.org/web/packages/vegan/index.html). Thus, implementation details are more similar to `adonis2` than to the original work by McArdle and Anderson. P-values are calculated via permuting of data (not residuals) and calculating sequential sums of squares. In keeping with names from mythology, we provide an alias to the `permanova` function :`hydra` the many headed Lernaean Hydra represents the multivariate response data we aim to tackle here. Though perhaps Heracles or Iolis (the eventual slayers of the Hydra) would be more apt.

<img src="https://github.com/EvoArt/Hydra/blob/master/docs/Sargent_Hercules.jpg" alt="drawing" width="400"/>

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## Example
```julia
using PerMANOVA, DataFrames,Distances
using PERMANOVA, DataFrames,Distances
x = rand(1:4,100)
y = rand(100,5)

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