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Anicet Ebou edited this page Jul 18, 2024 · 2 revisions

Contents

  1. "Hello World!"
  2. search tutorial
  3. genome tutorial
  4. taxon tutorial

Hello World!

search tutorial

I want to search for all Escherichia coli genomes in GTDB

# Please pay attention to quotes which are required for multiple words
xgt search "Escherichia coli"

# Or you can use the taxon name
xgt search "s__Escherichia coli"

I want to do a partial search for the Escherichia genus

xgt search -p Escherichia

# or

xgt search -p g__Escherichia

genome tutorial

taxon tutorial

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