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14 Open 10 Closed
14 Open 10 Closed
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Issues list

Implement A la carte updating of JGI data documentation documentation enhancement New feature or request
#33 opened Dec 14, 2023 by colemathis
5 tasks
@camerianm
JGI Requires Chromedriver bug Something isn't working documentation documentation
#29 opened Sep 26, 2022 by colemathis
@colemathis @camerianm
Fix metagenome JGI scraping bug Something isn't working
#21 opened Nov 26, 2019 by hbsmith
add ability to make KEGG graph and reaction list directly (no jgi jsons required) enhancement New feature or request
#20 opened Nov 26, 2019 by hbsmith
Fix full_url to correctly save as a url
#16 opened Aug 31, 2019 by bxk334
Change CLI from docopt to argparse enhancement New feature or request
#15 opened Aug 15, 2019 by hbsmith
move CLI out of kegg.py, jgi.py, ecg.py and into script/ecg.py enhancement New feature or request
#14 opened Aug 15, 2019 by hbsmith
Add ability to read in a json of organism_urls from command line enhancement New feature or request
#10 opened Jul 24, 2019 by hbsmith
Add method to update data from a JGI domain enhancement New feature or request
#9 opened Jul 24, 2019 by hbsmith
raising warning before scraping causes multiple tqdm bars in jupyter bug Something isn't working
#8 opened Jul 23, 2019 by hbsmith
2
Provide shorter version of options in CLI enhancement New feature or request
#7 opened Jul 18, 2019 by thyamu
ADD more information for the progress bars for downloading KEGG and other db enhancement New feature or request
#6 opened Jul 18, 2019 by thyamu
1
Update local omic database with only new and modified genomes enhancement New feature or request
#2 opened May 30, 2019 by hbsmith
Check if an EC number was changed/updated enhancement New feature or request
#1 opened May 30, 2019 by hbsmith
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