Optimize interval access and bump version

EBI-Metagenomics · Feb 25, 2024 · 050e8fe · 050e8fe
1 parent c707fe4
commit 050e8fe
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Showing 2 changed files with 3 additions and 3 deletions.
diff --git a/snap/deciphon_snap/view.py b/snap/deciphon_snap/view.py
@@ -48,8 +48,8 @@ def make_hmmer_steps(annot: DomAnnot):
         a = x.align
         core_positions = a.core_positions
         core_positions = list(range(a.core_interval.start, a.core_interval.stop + 1))
-        start = a.query_interval.to_pyinterval().start
-        stop = a.query_interval.to_pyinterval().stop
+        start = a.query_interval.py.start
+        stop = a.query_interval.py.stop
         offset = start - 1
         amino_pos = [offset + i for i in accumulate([int(i != "-") for i in a.query])]
         assert amino_pos[0] == start

diff --git a/snap/pyproject.toml b/snap/pyproject.toml
@@ -1,6 +1,6 @@
 [tool.poetry]
 name = "deciphon-snap"
-version = "0.10.1"
+version = "0.10.2"
 description = "Reader for Deciphon snap files."
 authors = ["Danilo Horta <[email protected]>"]
 license = "MIT"