AmpliCI now is available on Bioconda. You can install AmpliCI with conda install
.
conda install bioconda::amplici
Then you can run AmpliCI under your current conda environment.
run_AmpliCI -h
Other important updates on AmpliCI repository.
- Bug fixed in beta-binomial distribution with no change to the results.
- Bug fixed for DAUMI (for sequences with UMI). Now recommend using --nJC69 option to get the initial haplotypes (for sequences with UMIs ONLY), with improved performance on simulation datasets.
- Edits on CMakeLists.txt to make the package built under the conda build system.