generate exit code from awk search

DessimozLab · Oct 10, 2024 · d8ba0b4 · d8ba0b4
1 parent 3f3dd1a
commit d8ba0b4
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/.github/workflows/run-testdataset.yml b/.github/workflows/run-testdataset.yml
@@ -40,4 +40,4 @@ jobs:
       run: |
         ls test-results
         gunzip -c test-results/12_linearized_synteny_graph_edges.tsv.gz | head -n 10
-        gunzip -c test-results/12_linearized_synteny_graph_edges.tsv.gz | awk '/HOG_HOG:0000217_13\tHOG_HOG:0000282_13/'
+        gunzip -c test-results/12_linearized_synteny_graph_edges.tsv.gz | awk '/HOG_HOG:0000217_13\tHOG_HOG:0000282_13/{c = $2 > 0} END {exit !c}'