Add package:: before colData to avoid no visible function.

DavisLaboratory · Mar 26, 2024 · b958720 · b958720
1 parent 03dc19f
commit b958720
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Showing 2 changed files with 6 additions and 3 deletions.
diff --git a/DESCRIPTION b/DESCRIPTION
@@ -20,10 +20,10 @@ Collate:
     'tf_idf_iae_wrappers.R'
     'score.R'
     'AllGenerics.R'
-    'smartid-package.R'
     'gs_score-methods.R'
     'plot.R'
     'scale_mgm.R'
+    'smartid-package.R'
     'score-methods.R'
     'select_markers.R'
     'top_markers.R'

diff --git a/R/gs_score-methods.R b/R/gs_score-methods.R
@@ -1,4 +1,4 @@
-#' @include score.R smartid-package.R
+#' @include score.R
 NULL
 
 #' @rdname gs_score
@@ -64,7 +64,10 @@ setMethod(
     ## compute score
     score <- gs_score(data = expr, features = features, suffix = suffix)
 
-    colData(data) <- cbind(colData(data), score)
+    SummarizedExperiment::colData(data) <- cbind(
+      SummarizedExperiment::colData(data),
+      score
+    )
 
     return(data)
   }