FE-349 data clean up for hca ingest manifest.py #340
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…tions upper case. Also removed the load_hca partition creation - that pipeline is no longer used, and added TEST location for dev
…est-manifest-dot-py' into FE-349-data-clean-up-for-hca-ingest-manifest-dot-py
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…est-manifest-dot-py' into FE-349-data-clean-up-for-hca-ingest-manifest-dot-py
…est-manifest-dot-py' into FE-349-data-clean-up-for-hca-ingest-manifest-dot-py
…est-manifest-dot-py' into FE-349-data-clean-up-for-hca-ingest-manifest-dot-py
…est-manifest-dot-py' into FE-349-data-clean-up-for-hca-ingest-manifest-dot-py
…est-manifest-dot-py' into FE-349-data-clean-up-for-hca-ingest-manifest-dot-py
snovod
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Nov 15, 2024
sahakiann
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Nov 15, 2024
bahill
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Why
Relevant ticket FE-349
This PR
Errors in the wrangler-provided values can cause errors in the ingest pipeline.
To save time in debugging and clean up, I've should updated the script to:
I also removed an unused partition set, and updated the readme with information about binary authorization (no secrets, just that it exists, in case someone runs into issues pulling a new image), and because of BA added a clear declaration of the location of the Scala image.
Tested on the dev instance
Snapshot on Dev TDR
Checklist