update visualization cells

DanielaSchacherer · Aug 6, 2024 · 94b888c · 94b888c
1 parent 834cc08
commit 94b888c
Showing 1 changed file with 22 additions and 25 deletions.
diff --git a/notebooks/collections_demos/prostate-MRI_hiplot_experiments.ipynb b/notebooks/collections_demos/prostate-MRI_hiplot_experiments.ipynb
@@ -5,7 +5,7 @@
     "colab": {
       "provenance": [],
       "toc_visible": true,
-      "authorship_tag": "ABX9TyO4XqnB1lmQp1ryisGHcXVr",
+      "authorship_tag": "ABX9TyPmJ4i9ybO1blpsixLw3dAY",
       "include_colab_link": true
     },
     "kernelspec": {
@@ -734,7 +734,9 @@
         "\n",
         "Authored by Andrey Fedorov and Deepa Krishnaswamy\n",
         "\n",
-        "Initial version: February 2024"
+        "Initial version: February 2024\n",
+        "\n",
+        "Updated: August 2024"
       ],
       "metadata": {
         "id": "qIGRc4aUP6rk"
@@ -1204,33 +1206,28 @@
         "series_url = c.get_viewer_URL(seriesInstanceUID=series_instance_uid)\n",
         "study_url = series_url.split(\"?\")[0]\n",
         "\n",
-        "from IPython.display import HTML\n",
-        "HTML(f'Study URL: <a href=\"{study_url}\">{study_url}</a><br>Series URL: <a href=\"{series_url}\">{series_url}</a>'+'<br>'*50)"
+        "# view entire study\n",
+        "from IPython.display import IFrame\n",
+        "IFrame(study_url, width=1600, height=900)"
       ],
       "metadata": {
-        "colab": {
-          "base_uri": "https://localhost:8080/",
-          "height": 902
-        },
-        "id": "haEA8KMmhWEp",
-        "outputId": "1f159f90-2c3c-45da-9d55-50a95216a3c2"
+        "id": "haEA8KMmhWEp"
       },
       "execution_count": null,
-      "outputs": [
-        {
-          "output_type": "execute_result",
-          "data": {
-            "text/plain": [
-              "<IPython.core.display.HTML object>"
-            ],
-            "text/html": [
-              "Study URL: <a href=\"https://viewer.imaging.datacommons.cancer.gov/viewer/1.3.6.1.4.1.14519.5.2.1.3983.4006.178756877618396339373024634211\">https://viewer.imaging.datacommons.cancer.gov/viewer/1.3.6.1.4.1.14519.5.2.1.3983.4006.178756877618396339373024634211</a><br>Series URL: <a href=\"https://viewer.imaging.datacommons.cancer.gov/viewer/1.3.6.1.4.1.14519.5.2.1.3983.4006.178756877618396339373024634211?SeriesInstanceUID=1.3.6.1.4.1.14519.5.2.1.3983.4006.185971477634236436836567638064\">https://viewer.imaging.datacommons.cancer.gov/viewer/1.3.6.1.4.1.14519.5.2.1.3983.4006.178756877618396339373024634211?SeriesInstanceUID=1.3.6.1.4.1.14519.5.2.1.3983.4006.185971477634236436836567638064</a><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br><br>"
-            ]
-          },
-          "metadata": {},
-          "execution_count": 11
-        }
-      ]
+      "outputs": []
+    },
+    {
+      "cell_type": "code",
+      "source": [
+        "# view selected series only\n",
+        "from IPython.display import IFrame\n",
+        "IFrame(series_url, width=1600, height=900)"
+      ],
+      "metadata": {
+        "id": "rIlwly5wcTA2"
+      },
+      "execution_count": null,
+      "outputs": []
     },
     {
       "cell_type": "markdown",