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release v1.1.18 #21

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Jul 15, 2024
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3 changes: 3 additions & 0 deletions .Rbuildignore
Original file line number Diff line number Diff line change
Expand Up @@ -11,3 +11,6 @@ LICENSE.md
^tic\.R$
^\.covrignore$
^README\.Rmd$
^_pkgdown\.yml$
^docs$
^pkgdown$
1 change: 1 addition & 0 deletions .github/.gitignore
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@@ -0,0 +1 @@
*.html
52 changes: 52 additions & 0 deletions .github/workflows/R-CMD-check.yaml
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@@ -0,0 +1,52 @@
# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
on:
push:
branches: [main, master]
pull_request:
branches: [main, master]

name: R-CMD-check

permissions: read-all

jobs:
R-CMD-check:
runs-on: ${{ matrix.config.os }}

name: ${{ matrix.config.os }} (${{ matrix.config.r }})

strategy:
fail-fast: false
matrix:
config:
- {os: macos-latest, r: 'release'}
- {os: windows-latest, r: 'release'}
- {os: ubuntu-latest, r: 'devel', http-user-agent: 'release'}
- {os: ubuntu-latest, r: 'release'}
- {os: ubuntu-latest, r: 'oldrel-1'}

env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
R_KEEP_PKG_SOURCE: yes

steps:
- uses: actions/checkout@v4

- uses: r-lib/actions/setup-pandoc@v2

- uses: r-lib/actions/setup-r@v2
with:
r-version: ${{ matrix.config.r }}
http-user-agent: ${{ matrix.config.http-user-agent }}
use-public-rspm: true

- uses: r-lib/actions/setup-r-dependencies@v2
with:
extra-packages: any::rcmdcheck
needs: check

- uses: r-lib/actions/check-r-package@v2
with:
upload-snapshots: true
build_args: 'c("--no-manual","--compact-vignettes=gs+qpdf")'
50 changes: 50 additions & 0 deletions .github/workflows/pkgdown.yaml
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@@ -0,0 +1,50 @@
# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
on:
push:
branches: [main, master]
pull_request:
branches: [main, master]
release:
types: [published]
workflow_dispatch:

name: pkgdown

permissions: read-all

jobs:
pkgdown:
runs-on: ubuntu-latest
# Only restrict concurrency for non-PR jobs
concurrency:
group: pkgdown-${{ github.event_name != 'pull_request' || github.run_id }}
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
permissions:
contents: write
steps:
- uses: actions/checkout@v4

- uses: r-lib/actions/setup-pandoc@v2

- uses: r-lib/actions/setup-r@v2
with:
use-public-rspm: true

- uses: r-lib/actions/setup-r-dependencies@v2
with:
extra-packages: any::pkgdown, local::.
needs: website

- name: Build site
run: pkgdown::build_site_github_pages(new_process = FALSE, install = FALSE)
shell: Rscript {0}

- name: Deploy to GitHub pages 🚀
if: github.event_name != 'pull_request'
uses: JamesIves/[email protected]
with:
clean: false
branch: gh-pages
folder: docs
61 changes: 61 additions & 0 deletions .github/workflows/test-coverage.yaml
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@@ -0,0 +1,61 @@
# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
on:
push:
branches: [main, master]
pull_request:
branches: [main, master]

name: test-coverage

permissions: read-all

jobs:
test-coverage:
runs-on: ubuntu-latest
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}

steps:
- uses: actions/checkout@v4

- uses: r-lib/actions/setup-r@v2
with:
use-public-rspm: true

- uses: r-lib/actions/setup-r-dependencies@v2
with:
extra-packages: any::covr, any::xml2
needs: coverage

- name: Test coverage
run: |
cov <- covr::package_coverage(
quiet = FALSE,
clean = FALSE,
install_path = file.path(normalizePath(Sys.getenv("RUNNER_TEMP"), winslash = "/"), "package")
)
covr::to_cobertura(cov)
shell: Rscript {0}

- uses: codecov/codecov-action@v4
with:
fail_ci_if_error: ${{ github.event_name != 'pull_request' && true || false }}
file: ./cobertura.xml
plugin: noop
disable_search: true
token: ${{ secrets.CODECOV_TOKEN }}

- name: Show testthat output
if: always()
run: |
## --------------------------------------------------------------------
find '${{ runner.temp }}/package' -name 'testthat.Rout*' -exec cat '{}' \; || true
shell: bash

- name: Upload test results
if: failure()
uses: actions/upload-artifact@v4
with:
name: coverage-test-failures
path: ${{ runner.temp }}/package
103 changes: 0 additions & 103 deletions .github/workflows/tic.yml

This file was deleted.

52 changes: 0 additions & 52 deletions .github/workflows/update-tic.yml

This file was deleted.

1 change: 1 addition & 0 deletions .gitignore
Original file line number Diff line number Diff line change
Expand Up @@ -4,3 +4,4 @@
.Ruserdata
docs/
.DS_Store
docs
4 changes: 2 additions & 2 deletions DESCRIPTION
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@@ -1,6 +1,6 @@
Package: extractOz
Title: Extract Australian Soil, Weather and GRDC Agro-ecological Zone Information from GPS Points
Version: 1.1.7
Version: 1.1.8
Authors@R: c(person(given = "Adam H.", family = "Sparks",
email = "[email protected]",
role = c("aut", "ccp"),
Expand Down Expand Up @@ -51,7 +51,7 @@ Language: en-US
X-schema.org-applicationCategory: Tools
X-schema.org-keywords: agriculture, Australia, agroecology, soils, weather, weather-data, soils-data, agriculture-research
X-schema.org-isPartOf: https://www.dpird.wa.gov.au/
URL: https://github.com/DPIRD-FSI/extractOz
URL: https://github.com/DPIRD-FSI/extractOz, https://dpird-fsi.github.io/extractOz/
BugReports: https://github.com/DPIRD-FSI/extractOz/issues
LazyData: true
LazyDataCompression: xz
Expand Down
22 changes: 22 additions & 0 deletions NEWS.md
Original file line number Diff line number Diff line change
@@ -1,3 +1,25 @@
# extractOz 1.1.17

## Bug Fixes

- Fixes caching for DAAS data

## Minor Changes

- `df_to_list()` now supports {data.table} objects.
- `df_to_list()` now supports columns not named "x" and "y" for the longitude and latitude values in the df to transform.

# extractOz 1.1.17

## Minor Changes

- You can now extract soil order information anywhere in AU, not just within the AE Zones.

# extractOz 1.1.16

## Minor changes

- Australia lat lon checks now align with {weatherOz} checks

# extractOz 1.1.5

Expand Down
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