Merge pull request #361 from DARMA-tasking/360-fix-documentation-miss…

…ing-doxyfile-mcss #360: fix documentation build unable to find `Doxyfile-mcss`
DARMA-tasking · Jul 17, 2024 · 1eba7cc · 1eba7cc
2 parents a7f90d0 + 02568cf
commit 1eba7cc
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Showing 19 changed files with 59 additions and 60 deletions.
diff --git a/.github/workflows/build-docs.yml b/.github/workflows/build-docs.yml
@@ -22,6 +22,6 @@ jobs:
       TOKEN: ${{ secrets.GH_PAT }}
 
     steps:
-    - uses: actions/checkout@v3
+    - uses: actions/checkout@v4
     - name: Build the Docker image
       run: docker-compose run ubuntu-docs
diff --git a/.github/workflows/check-commit-format.yml b/.github/workflows/check-commit-format.yml
@@ -7,10 +7,9 @@ jobs:
     name: Check commit
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
         with:
           fetch-depth: 0
-          ref: ${{ github.event.pull_request.head.sha }}
       - name: Fetch base_ref HEAD
         run: git fetch origin +refs/heads/${{github.base_ref}}:refs/remotes/origin/${{github.base_ref}}
       - name: Display base sha

diff --git a/.github/workflows/check-trailing-whitespace.yml b/.github/workflows/check-trailing-whitespace.yml
@@ -7,5 +7,5 @@ jobs:
     name: Find Trailing Whitespace
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
       - uses: DARMA-tasking/find-trailing-whitespace@master
diff --git a/.github/workflows/dockerimage-clang-10-ubuntu-mpich.yml b/.github/workflows/dockerimage-clang-10-ubuntu-mpich.yml
@@ -43,15 +43,15 @@ jobs:
     - name: Prepare caching timestamp
       run: |
         echo "timestamp=$(TZ=UTC date +"%Y-%m-%d-%H;%M;%S")" >> $GITHUB_ENV
-    - uses: actions/cache@v3
+    - uses: actions/cache@v4
       env:
         cache-name: ubuntu-clang-10-cache
       with:
         path: ${{ env.BUILD_ROOT }}/ccache
         key: ${{ runner.os }}-${{ env.cache-name }}-${{ env.timestamp }}
         restore-keys: |
           ${{ runner.os }}-${{ env.cache-name }}-
-    - uses: actions/checkout@v3
+    - uses: actions/checkout@v4
       with:
         fetch-depth: 0
     - name: Prepare the base Docker image
@@ -73,11 +73,11 @@ jobs:
       run: |
         zip -j LastTest.log.gz ${{ env.BUILD_ROOT }}/checkpoint/Testing/Temporary/LastTest.log
         zip -j cmake-output.log.gz ${{ env.BUILD_ROOT }}/checkpoint/cmake-output.log
-    - uses: actions/upload-artifact@v1
+    - uses: actions/upload-artifact@v4
       with:
         name: CMake test output
         path: cmake-output.log.gz
-    - uses: actions/upload-artifact@v1
+    - uses: actions/upload-artifact@v4
       with:
         name: CMake full output
         path: LastTest.log.gz
diff --git a/.github/workflows/dockerimage-clang-11-ubuntu-mpich-vt.yml b/.github/workflows/dockerimage-clang-11-ubuntu-mpich-vt.yml
@@ -39,19 +39,19 @@ jobs:
     - name: Prepare caching timestamp
       run: |
         echo "timestamp=$(TZ=UTC date +"%Y-%m-%d-%H;%M;%S")" >> $GITHUB_ENV
-    - uses: actions/cache@v3
+    - uses: actions/cache@v4
       env:
         cache-name: ubuntu-clang-11-cache
       with:
         path: ${{ env.BUILD_ROOT }}/ccache
         key: ${{ runner.os }}-${{ env.cache-name }}-${{ steps.cache_ts.outputs.timestamp }}
         restore-keys: |
           ${{ runner.os }}-${{ env.cache-name }}-
-    - uses: actions/checkout@v3
+    - uses: actions/checkout@v4
       with:
         repository: DARMA-tasking/vt
         ref: develop
-    - uses: actions/checkout@v3
+    - uses: actions/checkout@v4
       with:
         fetch-depth: 0
     - name: Prepare the base Docker image

diff --git a/.github/workflows/dockerimage-clang-11-ubuntu-mpich.yml b/.github/workflows/dockerimage-clang-11-ubuntu-mpich.yml
@@ -43,15 +43,15 @@ jobs:
     - name: Prepare caching timestamp
       run: |
         echo "timestamp=$(TZ=UTC date +"%Y-%m-%d-%H;%M;%S")" >> $GITHUB_ENV
-    - uses: actions/cache@v3
+    - uses: actions/cache@v4
       env:
         cache-name: ubuntu-clang-11-cache
       with:
         path: ${{ env.BUILD_ROOT }}/ccache
         key: ${{ runner.os }}-${{ env.cache-name }}-${{ env.timestamp }}
         restore-keys: |
           ${{ runner.os }}-${{ env.cache-name }}-
-    - uses: actions/checkout@v3
+    - uses: actions/checkout@v4
       with:
         fetch-depth: 0
     - name: Prepare the base Docker image
@@ -73,11 +73,11 @@ jobs:
       run: |
         zip -j LastTest.log.gz ${{ env.BUILD_ROOT }}/checkpoint/Testing/Temporary/LastTest.log
         zip -j cmake-output.log.gz ${{ env.BUILD_ROOT }}/checkpoint/cmake-output.log
-    - uses: actions/upload-artifact@v1
+    - uses: actions/upload-artifact@v4
       with:
         name: CMake test output
         path: cmake-output.log.gz
-    - uses: actions/upload-artifact@v1
+    - uses: actions/upload-artifact@v4
       with:
         name: CMake full output
         path: LastTest.log.gz
diff --git a/.github/workflows/dockerimage-clang-12-ubuntu-mpich.yml b/.github/workflows/dockerimage-clang-12-ubuntu-mpich.yml
@@ -43,15 +43,15 @@ jobs:
     - name: Prepare caching timestamp
       run: |
         echo "timestamp=$(TZ=UTC date +"%Y-%m-%d-%H;%M;%S")" >> $GITHUB_ENV
-    - uses: actions/cache@v3
+    - uses: actions/cache@v4
       env:
         cache-name: ubuntu-clang-12-cache
       with:
         path: ${{ env.BUILD_ROOT }}/ccache
         key: ${{ runner.os }}-${{ env.cache-name }}-${{ env.timestamp }}
         restore-keys: |
           ${{ runner.os }}-${{ env.cache-name }}-
-    - uses: actions/checkout@v3
+    - uses: actions/checkout@v4
       with:
         fetch-depth: 0
     - name: Prepare the base Docker image
@@ -73,11 +73,11 @@ jobs:
       run: |
         zip -j LastTest.log.gz ${{ env.BUILD_ROOT }}/checkpoint/Testing/Temporary/LastTest.log
         zip -j cmake-output.log.gz ${{ env.BUILD_ROOT }}/checkpoint/cmake-output.log
-    - uses: actions/upload-artifact@v1
+    - uses: actions/upload-artifact@v4
       with:
         name: CMake test output
         path: cmake-output.log.gz
-    - uses: actions/upload-artifact@v1
+    - uses: actions/upload-artifact@v4
       with:
         name: CMake full output
         path: LastTest.log.gz
diff --git a/.github/workflows/dockerimage-clang-13-ubuntu-mpich.yml b/.github/workflows/dockerimage-clang-13-ubuntu-mpich.yml
@@ -43,15 +43,15 @@ jobs:
     - name: Prepare caching timestamp
       run: |
         echo "timestamp=$(TZ=UTC date +"%Y-%m-%d-%H;%M;%S")" >> $GITHUB_ENV
-    - uses: actions/cache@v3
+    - uses: actions/cache@v4
       env:
         cache-name: ubuntu-clang-13-cache
       with:
         path: ${{ env.BUILD_ROOT }}/ccache
         key: ${{ runner.os }}-${{ env.cache-name }}-${{ env.timestamp }}
         restore-keys: |
           ${{ runner.os }}-${{ env.cache-name }}-
-    - uses: actions/checkout@v3
+    - uses: actions/checkout@v4
       with:
         fetch-depth: 0
     - name: Prepare the base Docker image
@@ -73,11 +73,11 @@ jobs:
       run: |
         zip -j LastTest.log.gz ${{ env.BUILD_ROOT }}/checkpoint/Testing/Temporary/LastTest.log
         zip -j cmake-output.log.gz ${{ env.BUILD_ROOT }}/checkpoint/cmake-output.log
-    - uses: actions/upload-artifact@v1
+    - uses: actions/upload-artifact@v4
       with:
         name: CMake test output
         path: cmake-output.log.gz
-    - uses: actions/upload-artifact@v1
+    - uses: actions/upload-artifact@v4
       with:
         name: CMake full output
         path: LastTest.log.gz
diff --git a/.github/workflows/dockerimage-clang-14-ubuntu-mpich.yml b/.github/workflows/dockerimage-clang-14-ubuntu-mpich.yml
@@ -43,15 +43,15 @@ jobs:
     - name: Prepare caching timestamp
       run: |
         echo "timestamp=$(TZ=UTC date +"%Y-%m-%d-%H;%M;%S")" >> $GITHUB_ENV
-    - uses: actions/cache@v3
+    - uses: actions/cache@v4
       env:
         cache-name: ubuntu-clang-14-cache
       with:
         path: ${{ env.BUILD_ROOT }}/ccache
         key: ${{ runner.os }}-${{ env.cache-name }}-${{ env.timestamp }}
         restore-keys: |
           ${{ runner.os }}-${{ env.cache-name }}-
-    - uses: actions/checkout@v3
+    - uses: actions/checkout@v4
       with:
         fetch-depth: 0
     - name: Prepare the base Docker image
@@ -73,11 +73,11 @@ jobs:
       run: |
         zip -j LastTest.log.gz ${{ env.BUILD_ROOT }}/checkpoint/Testing/Temporary/LastTest.log
         zip -j cmake-output.log.gz ${{ env.BUILD_ROOT }}/checkpoint/cmake-output.log
-    - uses: actions/upload-artifact@v1
+    - uses: actions/upload-artifact@v4
       with:
         name: CMake test output
         path: cmake-output.log.gz
-    - uses: actions/upload-artifact@v1
+    - uses: actions/upload-artifact@v4
       with:
         name: CMake full output
         path: LastTest.log.gz
diff --git a/.github/workflows/dockerimage-clang-8-ubuntu-mpich.yml b/.github/workflows/dockerimage-clang-8-ubuntu-mpich.yml
@@ -43,15 +43,15 @@ jobs:
     - name: Prepare caching timestamp
       run: |
         echo "timestamp=$(TZ=UTC date +"%Y-%m-%d-%H;%M;%S")" >> $GITHUB_ENV
-    - uses: actions/cache@v3
+    - uses: actions/cache@v4
       env:
         cache-name: ubuntu-clang-8-cache
       with:
         path: ${{ env.BUILD_ROOT }}/ccache
         key: ${{ runner.os }}-${{ env.cache-name }}-${{ env.timestamp }}
         restore-keys: |
           ${{ runner.os }}-${{ env.cache-name }}-
-    - uses: actions/checkout@v3
+    - uses: actions/checkout@v4
       with:
         fetch-depth: 0
     - name: Prepare the base Docker image
@@ -73,11 +73,11 @@ jobs:
       run: |
         zip -j LastTest.log.gz ${{ env.BUILD_ROOT }}/checkpoint/Testing/Temporary/LastTest.log
         zip -j cmake-output.log.gz ${{ env.BUILD_ROOT }}/checkpoint/cmake-output.log
-    - uses: actions/upload-artifact@v1
+    - uses: actions/upload-artifact@v4
       with:
         name: CMake test output
         path: cmake-output.log.gz
-    - uses: actions/upload-artifact@v1
+    - uses: actions/upload-artifact@v4
       with:
         name: CMake full output
         path: LastTest.log.gz
diff --git a/.github/workflows/dockerimage-clang-9-ubuntu-mpich.yml b/.github/workflows/dockerimage-clang-9-ubuntu-mpich.yml
@@ -43,15 +43,15 @@ jobs:
     - name: Prepare caching timestamp
       run: |
         echo "timestamp=$(TZ=UTC date +"%Y-%m-%d-%H;%M;%S")" >> $GITHUB_ENV
-    - uses: actions/cache@v3
+    - uses: actions/cache@v4
       env:
         cache-name: ubuntu-clang-9-cache
       with:
         path: ${{ env.BUILD_ROOT }}/ccache
         key: ${{ runner.os }}-${{ env.cache-name }}-${{ env.timestamp }}
         restore-keys: |
           ${{ runner.os }}-${{ env.cache-name }}-
-    - uses: actions/checkout@v3
+    - uses: actions/checkout@v4
       with:
         fetch-depth: 0
     - name: Prepare the base Docker image
@@ -73,11 +73,11 @@ jobs:
       run: |
         zip -j LastTest.log.gz ${{ env.BUILD_ROOT }}/checkpoint/Testing/Temporary/LastTest.log
         zip -j cmake-output.log.gz ${{ env.BUILD_ROOT }}/checkpoint/cmake-output.log
-    - uses: actions/upload-artifact@v1
+    - uses: actions/upload-artifact@v4
       with:
         name: CMake test output
         path: cmake-output.log.gz
-    - uses: actions/upload-artifact@v1
+    - uses: actions/upload-artifact@v4
       with:
         name: CMake full output
         path: LastTest.log.gz
diff --git a/.github/workflows/dockerimage-gcc-10-ubuntu-mpich.yml b/.github/workflows/dockerimage-gcc-10-ubuntu-mpich.yml
@@ -43,15 +43,15 @@ jobs:
     - name: Prepare caching timestamp
       run: |
         echo "timestamp=$(TZ=UTC date +"%Y-%m-%d-%H;%M;%S")" >> $GITHUB_ENV
-    - uses: actions/cache@v3
+    - uses: actions/cache@v4
       env:
         cache-name: ubuntu-gcc-10-cache
       with:
         path: ${{ env.BUILD_ROOT }}/ccache
         key: ${{ runner.os }}-${{ env.cache-name }}-${{ env.timestamp }}
         restore-keys: |
           ${{ runner.os }}-${{ env.cache-name }}-
-    - uses: actions/checkout@v3
+    - uses: actions/checkout@v4
       with:
         fetch-depth: 0
     - name: Prepare the base Docker image
@@ -73,11 +73,11 @@ jobs:
       run: |
         zip -j LastTest.log.gz ${{ env.BUILD_ROOT }}/checkpoint/Testing/Temporary/LastTest.log
         zip -j cmake-output.log.gz ${{ env.BUILD_ROOT }}/checkpoint/cmake-output.log
-    - uses: actions/upload-artifact@v1
+    - uses: actions/upload-artifact@v4
       with:
         name: CMake test output
         path: cmake-output.log.gz
-    - uses: actions/upload-artifact@v1
+    - uses: actions/upload-artifact@v4
       with:
         name: CMake full output
         path: LastTest.log.gz
diff --git a/.github/workflows/dockerimage-gcc-8-ubuntu-mpich.yml b/.github/workflows/dockerimage-gcc-8-ubuntu-mpich.yml
@@ -43,15 +43,15 @@ jobs:
     - name: Prepare caching timestamp
       run: |
         echo "timestamp=$(TZ=UTC date +"%Y-%m-%d-%H;%M;%S")" >> $GITHUB_ENV
-    - uses: actions/cache@v3
+    - uses: actions/cache@v4
       env:
         cache-name: ubuntu-gcc-8-cache
       with:
         path: ${{ env.BUILD_ROOT }}/ccache
         key: ${{ runner.os }}-${{ env.cache-name }}-${{ env.timestamp }}
         restore-keys: |
           ${{ runner.os }}-${{ env.cache-name }}-
-    - uses: actions/checkout@v3
+    - uses: actions/checkout@v4
       with:
         fetch-depth: 0
     - name: Prepare the base Docker image
@@ -73,11 +73,11 @@ jobs:
       run: |
         zip -j LastTest.log.gz ${{ env.BUILD_ROOT }}/checkpoint/Testing/Temporary/LastTest.log
         zip -j cmake-output.log.gz ${{ env.BUILD_ROOT }}/checkpoint/cmake-output.log
-    - uses: actions/upload-artifact@v1
+    - uses: actions/upload-artifact@v4
       with:
         name: CMake test output
         path: cmake-output.log.gz
-    - uses: actions/upload-artifact@v1
+    - uses: actions/upload-artifact@v4
       with:
         name: CMake full output
         path: LastTest.log.gz
diff --git a/.github/workflows/dockerimage-gcc-9-ubuntu-mpich.yml b/.github/workflows/dockerimage-gcc-9-ubuntu-mpich.yml
@@ -43,15 +43,15 @@ jobs:
     - name: Prepare caching timestamp
       run: |
         echo "timestamp=$(TZ=UTC date +"%Y-%m-%d-%H;%M;%S")" >> $GITHUB_ENV
-    - uses: actions/cache@v3
+    - uses: actions/cache@v4
       env:
         cache-name: ubuntu-gcc-9-cache
       with:
         path: ${{ env.BUILD_ROOT }}/ccache
         key: ${{ runner.os }}-${{ env.cache-name }}-${{ env.timestamp }}
         restore-keys: |
           ${{ runner.os }}-${{ env.cache-name }}-
-    - uses: actions/checkout@v3
+    - uses: actions/checkout@v4
       with:
         fetch-depth: 0
     - name: Prepare the base Docker image
@@ -73,11 +73,11 @@ jobs:
       run: |
         zip -j LastTest.log.gz ${{ env.BUILD_ROOT }}/checkpoint/Testing/Temporary/LastTest.log
         zip -j cmake-output.log.gz ${{ env.BUILD_ROOT }}/checkpoint/cmake-output.log
-    - uses: actions/upload-artifact@v1
+    - uses: actions/upload-artifact@v4
       with:
         name: CMake test output
         path: cmake-output.log.gz
-    - uses: actions/upload-artifact@v1
+    - uses: actions/upload-artifact@v4
       with:
         name: CMake full output
         path: LastTest.log.gz