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Publication versions #57

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@jochenklar jochenklar commented Jul 28, 2023 •
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This PR will add the functionality to add new versions for already published samples or reactions.

  • Fix issues with the setup when starting with an empty database
  • Add functionality to create a new sample versions
  • Link analysis of already published samples instead of copying them
  • Resubmit new sample versions
  • Publish new sample versions
  • Update Sample DataCite Metadata
  • Add functionality to create a new reaction versions, copy samples, but link analyses
  • Resubmit and publish new reaction versions
  • Refactor publications interface to take versions into account

phuang26 and others added 30 commits February 7, 2023 21:34
@phuang26
Merge branch '511-link-collection-doi-to-embargo-page' into 'server_c…
6ff54b6 
…hemotion_net-5'

Resolve "link collection doi to embargo page"

Closes #511

See merge request ComPlat/chemotion_REPO!460
@phuang26
Merge branch '512-fix-the-bug-for-hyperlink-export' into 'server_chem…
e2e7898 
…otion_net-5'

Resolve "fix the bug for hyperlink export"

Closes #512

See merge request ComPlat/chemotion_REPO!461
@cllde8
workaround for react-svg-file-zoom-pan-latest library issue
e6a141e
@phuang26
Merge branch '514-svg-does-not-load-properly' into 'server_chemotion_…
0a43d52 
…net-5'

Resolve "svg does not load properly"

Closes #514

See merge request ComPlat/chemotion_REPO!463
@phuang26
chem converter
af8153f
@phuang26
Merge branch '513-chem-converter' into 'server_chemotion_net-5'
04196b7 
Resolve "chem converter"

Closes #513

See merge request ComPlat/chemotion_REPO!462
@cllde8
fixed: redirect to the latest published element successfully, but no …
c9e700d 
…details shown
@phuang26
Merge branch '515-the-latest-published-element-is-not-shown' into 'se…
3a8c4cb 
…rver_chemotion_net-5'

Resolve "the latest published element is not shown"

Closes #515

See merge request ComPlat/chemotion_REPO!464
@phuang26
review comment fix
c02680c
@phuang26
Merge branch '508-doi-and-comments' into 'server_chemotion_net-5'
24f2b3e 
Resolve "doi and comments"

Closes #508

See merge request ComPlat/chemotion_REPO!466
@cllde8
hide info when inchikey is dummy
fbb6646
@phuang26
Merge branch '516-update-publication-for-decoupled-sample' into 'serv…
374d6af 
…er_chemotion_net-5'

Resolve "update publication for decoupled sample"

Closes #516

See merge request ComPlat/chemotion_REPO!465
@phuang26
embargo btns
8b2f237
@phuang26
hr to h
065286f
@phuang26
Merge branch '517-product-w-no-name' into 'server_chemotion_net-5'
9c2a0ae 
Resolve "product w no name"

Closes #517

See merge request ComPlat/chemotion_REPO!468
@PiTrem
Update Navigation.js
97159be
@phuang26
converter for user
52862ac
@phuang26
Merge branch '519-converter-for-user' into 'server_chemotion_net-5'
dd5c327 
Resolve "converter for user"

Closes #519

See merge request ComPlat/chemotion_REPO!469
@phuang26
converter config file
04166d8
@phuang26
embargo email issue
d66fefc
@phuang26
upgrade chemspectra
4fb86b0
@phuang26
fix duplicated img
0d56470
@phuang26
Merge branch '520-upgrade-chemspectra' into 'server_chemotion_net-5'
e329bfd 
Resolve "upgrade chemspectra"

Closes #520

See merge request ComPlat/chemotion_REPO!471
@cllde8 @phuang26
Resolve "porting the 3d viewer"
ca55bcd
@phuang26
Merge branch '518-porting-the-3d-viewer' into 'server_chemotion_net-5'
5e591c2 
Resolve "porting the 3d viewer"

Closes #518

See merge request ComPlat/chemotion_REPO!467
@phuang26
Revert "Merge branch '520-upgrade-chemspectra' into 'server_chemotion…
bc4258b 
…_net-5'"

This reverts merge request !471
@phuang26
Merge branch 'revert-e329bfd6' into 'server_chemotion_net-5'
8e8424a 
Revert "Merge branch '520-upgrade-chemspectra' into 'server_chemotion_net-5'"

See merge request ComPlat/chemotion_REPO!472
@phuang26
upgrade chemspectra
e0cea6a
@phuang26
fix duplicated img
c0a7a9c
@phuang26
embargo job fix
0e382f7
jochenklar added 27 commits June 7, 2024 11:33
@jochenklar
Prevent creation of a new sample version when reaction is not changed
5948189
@jochenklar
Add previously created new sample version to new reaction version
1a43375
@jochenklar
Fix display of old sample versions
d568b13
@jochenklar
Cleanup create_new_reactions_samples_version code
98b50c7
@jochenklar
Fix create_new_sample_version
0076940
@jochenklar
Exclude already public samples from moving to the pending collection …
156172b 
…when

submitting a new reaction version
@jochenklar
Add replace_in_publication tag to indicate new sample versions without a
49b32fe 
new reaction version
@jochenklar
Fix disabling fields for new sample versions without new reaction ver…
92e8dfe 
…sions
@jochenklar
Use reaction_id from tag for new sample versions without reaction
c44cfb6
@jochenklar
Fix VersionDropdown
6641bfd
@jochenklar
Fix new sample version creation
563f637
@jochenklar
Fix version selection for sample versions on reaction publication page
a089404
@jochenklar
Add distinct to sample query
d24b63c
@jochenklar
Fix RenderAnalysisHeader
9f764ca
@jochenklar
Fix fix reactions list for old versions in publication view
16eea1f
@jochenklar
Fix RenderAnalysisHeader
c23d882
@jochenklar
Fix RepoReactionDetails
3143dc7
@jochenklar
Fix handleDisplayReaction in PublicStore
38224c1
@jochenklar
Fix handleGetReactions
31a5d94
@jochenklar
Fix handleDisplayReaction
f88402d
@jochenklar
Always show sample in review
f0942ec
@jochenklar
Filter reaction sample versions to only show versions with a complete…
15e359d 
…d publication
@jochenklar
Do not run tag_as_published on new versions
52b991a
@jochenklar
Fix resubmit button for new reaction versions
0add672
@jochenklar
Remove new element version and doi when declined
7bedbb7
@jochenklar
Check previous version in process_element
4f13ad3
@jochenklar
Fix ReviewPublishBtn
ae71279
@phuang26 phuang26 force-pushed the master branch 3 times, most recently from b124793 to 5b62524 Compare November 6, 2024 15:22
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4 participants
@jochenklar @phuang26 @cllde8 @PiTrem