GHA: force SpaDES.tools installation in workflow #55
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| on: | |
| push: | |
| branches: | |
| - master | |
| - development | |
| pull_request: | |
| branches: | |
| - master | |
| - development | |
| name: Render Quarto book | |
| jobs: | |
| render-quarto: | |
| if: | | |
| !contains(github.event.commits[0].message, '[skip-renderbook]') | |
| runs-on: ubuntu-20.04 | |
| env: | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| # RENV_PATHS_ROOT: ~/.local/share/renv | |
| R_LIBS_USER: /home/runner/work/_temp/Library | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Install Quarto | |
| uses: quarto-dev/quarto-actions/setup@v2 | |
| with: | |
| version: pre-release | |
| tinytex: true | |
| - name: Install pandoc | |
| run: | | |
| DEB=pandoc-2.19.2-1-amd64.deb | |
| wget https://github.com/jgm/pandoc/releases/download/2.19.2/$DEB | |
| sudo dpkg -i $DEB | |
| pandoc --version | |
| shell: bash | |
| - uses: PredictiveEcology/actions/install-spatial-deps@main | |
| - uses: r-lib/actions/setup-pandoc@v2 | |
| - uses: r-lib/actions/setup-r@v2 | |
| with: | |
| Ncpus: 2 | |
| use-public-rspm: false | |
| extra-repositories: 'https://predictiveecology.r-universe.dev/' | |
| - name: Install package dependencies | |
| uses: r-lib/actions/setup-r-dependencies@v2 | |
| with: | |
| cache: "always" | |
| cache-version: 1 | |
| packages: | | |
| any::cffr | |
| any::ggplot2 | |
| any::ggpubr | |
| any::htmlwidgets | |
| any::png | |
| any::quarto | |
| any::rcmdcheck | |
| any::rJava | |
| any::rmarkdown | |
| any::rnaturalearth | |
| any::rsvg | |
| any::terra | |
| any::V8 | |
| - name: Render book 🔧 | |
| run: Rscript render.R | |
| - name: Deploy 🚀 | |
| if: github.event_name != 'pull_request' | |
| uses: JamesIves/github-pages-deploy-action@v4 | |
| with: | |
| clean: false | |
| branch: gh-pages # The branch the action should deploy to. | |
| folder: . | |
| update-citation: | |
| needs: render-quarto | |
| runs-on: ubuntu-20.04 | |
| env: | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - uses: r-lib/actions/setup-r@v2 | |
| - uses: r-lib/actions/setup-r-dependencies@v2 | |
| with: | |
| packages: | | |
| any::cffr | |
| any::V8 | |
| - name: Update CITATION.cff | |
| run: | | |
| cffr::cff_write(dependencies = FALSE, authors_roles = c("aut", "cre", "ctb")) | |
| shell: Rscript {0} | |
| - name: Commit CITATION.cff update | |
| run: | | |
| git config --local user.name "github-actions[bot]" | |
| git config --local user.email "41898282+github-actions[bot]@users.noreply.github.com" | |
| git add CITATION.cff | |
| git commit -m 'Update CITATION.cff' || echo "No changes to commit" | |
| git push origin || echo "No changes to commit" | |