setup and cleanup: fix setup scripts for new repo, delete outdate and move tools. Add action for install + tests. #31
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sohamazing
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… move tools. Add action for install + tests. (Cephla-Lab#31) This fixes the setup scripts to use the new main repository at https://github.com/Cephla-Lab/Squid . It also deletes the outdated `setup_octopi.sh` script (Hongquan mentioned it was outdated and no longer used), moves some tooling scripts into the `tools` subdirectory, and generally does a bit of cleanup. This also introduces a github workflow that will run our setup scripts and run the python tests whenever pull requests are made, or master is updated. You can add new tests in `software/tests` by following the example already there. Tested by: The workflow runs and succeeds.
sohamazing
pushed a commit
to sohamazing/Squid-Research
that referenced
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Dec 6, 2024
… move tools. Add action for install + tests. (Cephla-Lab#31) This fixes the setup scripts to use the new main repository at https://github.com/Cephla-Lab/Squid . It also deletes the outdated `setup_octopi.sh` script (Hongquan mentioned it was outdated and no longer used), moves some tooling scripts into the `tools` subdirectory, and generally does a bit of cleanup. This also introduces a github workflow that will run our setup scripts and run the python tests whenever pull requests are made, or master is updated. You can add new tests in `software/tests` by following the example already there. Tested by: The workflow runs and succeeds.
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This fixes the setup scripts to use the new main repository at https://github.com/Cephla-Lab/Squid . It also deletes the outdated
setup_octopi.shscript (Hongquan mentioned it was outdated and no longer used), moves some tooling scripts into thetoolssubdirectory, and generally does a bit of cleanup.This also introduces a github workflow that will run our setup scripts and run the python tests whenever pull requests are made, or master is updated.
You can add new tests in
software/testsby following the example already there.Tested by: The workflow runs and succeeds.