rename and reknit

analysis-fig.R → figs.R

@@ -1,4 +1,4 @@
-source(knitr::purl("analysis.Rmd", output=tempfile()))
+source(knitr::purl("index.Rmd", output=tempfile()))
 
 ggplot(df.plot.papers) +
   aes(yearmon+2017, n) + facet_wrap(~category, scales="free_y") +
@@ -8,6 +8,7 @@ ggplot(df.plot.papers) +
   zoo::scale_x_yearmon(format="%Y") +
   labs(y="Number of papers per month", x=NULL)
 ggsave("img/Fig1.eps", width=190.5, height=100, units="mm", scale=1.6, device=cairo_ps)
+ggsave("img/Fig1.tiff", width=190.5, height=100, units="mm", scale=1.6)
 
 ggplot(df.plot.p_male) +
   aes(yearmon+2017, p_male) + facet_wrap(~category) +
@@ -18,6 +19,7 @@ ggplot(df.plot.p_male) +
   expand_limits(y=1) +
   labs(y="Proportion of male authors", x=NULL)
 ggsave("img/Fig2.eps", width=190.5, height=100, units="mm", scale=1.6, device=cairo_ps)
+ggsave("img/Fig2.tiff", width=190.5, height=100, units="mm", scale=1.6)
 
 ggplot(filter(df.terms, type=="GLMM" | is.na(type))) +
   aes(estimate, term, xmin=conf.low, xmax=conf.high, color=type) +
@@ -31,6 +33,7 @@ ggplot(filter(df.terms, type=="GLMM" | is.na(type))) +
   labs(y=NULL, x="Odds ratio", color="Model") +
   theme(legend.position="none")
 ggsave("img/Fig3.eps", width=132, height=100, units="mm", scale=1.6, device=cairo_ps)
+ggsave("img/Fig3.tiff", width=132, height=100, units="mm", scale=1.6)
 
 ggplot(df.re.category) +
   aes(estimate, term, xmin=conf.low, xmax=conf.high, color=group) +

analysis.Rmd → index.Rmd

@@ -1,6 +1,6 @@
 ---
 title: "Mind the gender gap: COVID-19 lockdown effects on gender differences in research"
-author: "Iñaki Úcar, Margarita Torre, Antonio Elías Fernández"
+author: "Iñaki Úcar, Margarita Torre, Antonio Elías"
 output:
   html_document:
     df_print: paged