error: redundant redefinition of a binding --> src/quant.rs:538:9 | 538 | let bc_type = rad_types::decode_int_type_tag(bct).expect("unsupported barcode type id."); | ^^^^^^^ ... 640 | let bc_type = bc_type; | ^^^^^^^^^^^^^^^^^^^^^^ | = help: remove the redefinition of `bc_type` = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#redundant_locals = note: `#[deny(clippy::redundant_locals)]` on by default

error: redundant redefinition of a binding --> src/quant.rs:539:9 | 539 | let umi_type = rad_types::decode_int_type_tag(umit).expect("unsupported umi type id."); | ^^^^^^^^ ... 641 | let umi_type = umi_type; | ^^^^^^^^^^^^^^^^^^^^^^^^ | = help: remove the redefinition of `umi_type` = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#redundant_locals

Clippy had exited with the 101 exit code

The job was canceled because "ubuntu-latest" failed.

The operation was canceled.

Unexpected input(s) 'token', valid inputs are ['toolchain', 'args', 'use-cross']

warning: explicit call to `.into_iter()` in function argument accepting `IntoIterator` --> src/collate.rs:121:38 | 121 | let mut tsv_map = Vec::from_iter(freq_hm.into_iter()); | ^^^^^^^^^^^^^^^^^^^ help: consider removing the `.into_iter()`: `freq_hm` | note: this parameter accepts any `IntoIterator`, so you don't need to call `.into_iter()` --> /rustc/cc66ad468955717ab92600c770da8c1601a4ff33/library/core/src/iter/traits/collect.rs:149:21 = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#useless_conversion = note: `#[warn(clippy::useless_conversion)]` on by default

warning: useless use of `vec!` --> src/convert.rs:45:16 | 45 | let nucl = vec!["A", "T", "G", "C"]; | ^^^^^^^^^^^^^^^^^^^^^^^^ help: you can use an array directly: `["A", "T", "G", "C"]` | = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#useless_vec = note: `#[warn(clippy::useless_vec)]` on by default

warning: use of `or_insert_with` to construct default value --> src/pugutils.rs:297:46 | 297 | let ve = components.entry(*v as u32).or_insert_with(Vec::new); | ^^^^^^^^^^^^^^^^^^^^^^^^ help: try: `or_default()` | = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unwrap_or_default = note: `#[warn(clippy::unwrap_or_default)]` on by default

warning: use of `or_insert_with` to construct default value --> src/pugutils.rs:818:42 | 818 | let umis = tmp_map.entry(vert.0).or_insert_with(Vec::new); | ^^^^^^^^^^^^^^^^^^^^^^^^ help: try: `or_default()` | = help: for further information visit https://rust-lang.github.io/rust-clippy/master/index.html#unwrap_or_default