It's been a long time since the last release, I don't know what all has changed. It can handle Majora's Mask ROMs now though, which I think is new. The progress tracker also looks better, though there's some artifacts from how it's done on Linux left over. Notably the "[2K" at the end instead of a "%". It still shows the important information though.
Oh right, the dmaTable.dat (or whatever it was called before) changed too. It's now a list of files that shouldn't be compressed instead of 1's and 0's. If you want to use this version, you'll need a new dmaTable.dat (which you get by running TabExt on a compressed rom, or by writing it yourself).
Windows only for now, I might add the others later