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Fix errors due to the major update of NumPy #28

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Fix errors due to the major update of NumPy #28

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3f84e6c
pinned numpy version to avoid breaking changes before major update
KeishiS Aug 28, 2024
3166a7e
updated load function to explicitly specify default values due to cha…
KeishiS Aug 29, 2024
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4 changes: 2 additions & 2 deletions Tutorial/demo_mutag.py
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Original file line number Diff line number Diff line change
Expand Up @@ -11,10 +11,10 @@

# Load data
# comment next line if data.mutag is in a different folder
mutag_list = np.load("graphkernels/data.mutag")
mutag_list = np.load("graphkernels/data.mutag", allow_pickle=True)

# Uncomment next line if data.mutag is in your current folder
#mutag_list = np.load("data.mutag")
#mutag_list = np.load("data.mutag", allow_pickle=True)

### ALL KERNELS COMPUTE
K1 = gk.CalculateEdgeHistKernel(mutag_list)
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4 changes: 2 additions & 2 deletions src/GKextCPy/setup.py
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Expand Up @@ -13,7 +13,7 @@

# Solve the chicken-and-egg problem of requiring packages *before* the
# script has been parsed.
for package in ['numpy', 'pkgconfig']:
for package in ['numpy<2.0', 'pkgconfig']:

# Don't try to install packages that already exist.
try:
Expand Down Expand Up @@ -55,7 +55,7 @@ def get_include_dirs():
)

setup(name = 'GKextCPy',
version = '0.4.1',
version = '0.4.2',
author = 'Elisabetta Ghisu',
description = """Graph Kernels: building the extension Python module. This is a wrapper package from C++ to Python.""",
ext_modules = [GKextCPy_module],
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