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created bia-export base package #125

Merged
merged 2 commits into from
Jul 23, 2024
Merged

created bia-export base package #125

merged 2 commits into from
Jul 23, 2024

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sherwoodf
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Set up the basics of the bia-export package to create studies for website from json files

root_directory: Path
) -> Study:
if root_directory:
study_path = root_directory.joinpath(f'studies/{accession_id}.json')
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Note - these paths are based on the cache path structure of the ingest code. The idea is we should be able to run the export with the root based on the local 'cache' after running ingest and get the json for the website

@@ -0,0 +1 @@
import pytest
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Ah i should have probably removed this - it is not being used (yet)

@sherwoodf sherwoodf merged commit 07e87d0 into main Jul 23, 2024
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@sherwoodf sherwoodf deleted the bia-export branch July 23, 2024 15:48
liviuba pushed a commit that referenced this pull request Jul 31, 2024
* created bia-export base package

* updated README
ctr26 pushed a commit that referenced this pull request Jul 31, 2024
* created bia-export base package

* updated README
ctr26 pushed a commit that referenced this pull request Aug 1, 2024
* created bia-export base package

* updated README
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2 participants