Covers topics from day 1 and 2 of the 2020 BIA course with a focus on data-analysis management
Is an introduction to creating (repeatable) machine learning environments using python *conda
Covers how to create data-analysis pipelines using snakemake for scaling data analysis up, particularly useful for running large machine learning operations on well-trained models
Contains a script for downloading ZeroCostDL4Mic data from zenodo
Deprecated pure python implementation of pulling ZeroCostDL4Mic data, easier to pull pure files via ftp.