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R tools for working with locally stored OBPG data.

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obtools

Extra R-language tools to supplement obpg R package. This package serves up R scripts to create a local data repository, or to update a local data repository on a regular basis.

Requirements for package

Requirements for scripts

The scripts can be pretty much anything that suits your needs. The default scripts that come with this package do require some packages which are listed here.

Scripts

  • update_obpg.R is used to update a particular data set by examining the existising database. It then attempts to fetch files on the server server that are newer than the most recent database record. It works for multiple parameters, but one resolution/region/instrument at a time. It draws upon a configuration such as this one.

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R tools for working with locally stored OBPG data.

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