Docker ParaViewWeb Container

This ParaViewWeb Docker container is used by the Galaxy Project.

Usage

• Build your own image and run it

Docker is a pre-requirement for this project. You can build the container with:

 docker build -t paraviewweb .

The build process can take some time, but if finished you can run your container with:

 docker run -p 8777:8777 -v /home/user/paraviewweb/input/:/input/ -v /home/user/paraviewweb/output/:/output/ paraviewweb

and you will have a running ParaViewWeb instance on http://localhost:8777/apps/Visualizer.

Environment Variables

Some environment variables are made available to the user which will allow for configuring the behaviour of individual instances.

Variable	Use
DATASET_HID	Path of file relative to /input which is loaded on startup

Acknowledgment

This work has been supported by the BMBF-funded Heidelberg Center for Human Bioinformatics (HD-HuB) within the German Network for Bioinformatics Infrastructure (de.NBI) #031A537C.

Works best with

• Galaxy Image Analysis Tools
• Galaxy Imaging