added hl7 fhir coding

BIH-CEI · Sep 21, 2024 · 64eb6ba · 64eb6ba
1 parent a2588bf
commit 64eb6ba
Showing 1 changed file with 8 additions and 1 deletion.
diff --git a/notebooks/rarelink_cdm_phenopacket_mapper.ipynb b/notebooks/rarelink_cdm_phenopacket_mapper.ipynb
@@ -101,6 +101,12 @@
     "    name='ICD-11', \n",
     "    namespace_prefix='icd11', \n",
     "    url='https://icd.who.int/en'\n",
+    ")\n",
+    "\n",
+    "HL7FHIR = CodeSystem(\n",
+    "    name='HL7 FHIR', \n",
+    "    namespace_prefix='hl7fhir', \n",
+    "    url='https://www.hl7.org/fhir/'\n",
     ")\n"
    ]
   },
@@ -280,7 +286,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 43,
+   "execution_count": 45,
    "metadata": {},
    "outputs": [],
    "source": [
@@ -350,6 +356,7 @@
     "                 \"data model in section rarelink_3_patient_status. The \"\n",
     "                 \"individual's age category at the time of data capture (1.2).\")\n",
     ")\n",
+    "\n",
     "# 3.5 Length of Gestation at Birth [weeks+days]\n",
     "# GA4GH Phenopacket Schema v2.0: n/a\n",
     "\n",