Skip to content
@BIDS-Xu-Lab

Clinical NLP Lab

Clinical NLP Lab

Clinical NLP Lab

Led by Dr. Hua Xu at Biomedical Informatics and Data Science, Yale School of Medicine

Homepage: https://clinicalnlp.org/

The lab has been devoted to developing novel natural language processing (NLP) methods, software, and applications for diverse biomedical texts, such as clinical notes, biomedical literature, and social media. These three areas complement each other: new methods lead to software that are used by many researchers, software facilitates clinical applications, and successful applications reveal where there is need for new methods, closing the loop and forming an ecosystem of our research activities in clinical NLP.

Pinned Loading

  1. Me-LLaMA Me-LLaMA Public

    A novel medical large language model family with 13/70B parameters, which have SOTA performances on various medical tasks

    Python 157 18

  2. bike bike Public

    Biomedical Knowledge Explorer

    HTML 2

Repositories

Showing 10 of 31 repositories
  • NovelTax Public
    BIDS-Xu-Lab/NovelTax’s past year of commit activity
    Python 0 Apache-2.0 0 0 0 Updated Jul 29, 2025
  • Kiwi-LLaMA Public
    BIDS-Xu-Lab/Kiwi-LLaMA’s past year of commit activity
    HTML 7 2 1 1 Updated Jul 16, 2025
  • medviz-milestone-monitor Public

    Monitor the milestone for journals, institutions, and anything we care.

    BIDS-Xu-Lab/medviz-milestone-monitor’s past year of commit activity
    JavaScript 1 Apache-2.0 0 0 0 Updated Jul 16, 2025
  • topicforest Public

    Demonstration of TopicForest on Biomedical Scientific Reports

    BIDS-Xu-Lab/topicforest’s past year of commit activity
    0 0 0 0 Updated Jul 15, 2025
  • BIDS-Xu-Lab.github.io Public

    Lab Webiste

    BIDS-Xu-Lab/BIDS-Xu-Lab.github.io’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Jul 14, 2025
  • LLM_usecase Public
    BIDS-Xu-Lab/LLM_usecase’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Jul 10, 2025
  • SemNovel Public

    A New Approach to Detecting Semantic Novelty of Biomedical Publications using Embeddings of Large Language

    BIDS-Xu-Lab/SemNovel’s past year of commit activity
    Python 1 Apache-2.0 0 0 0 Updated Jun 24, 2025
  • LLMs4SDoH Public
    BIDS-Xu-Lab/LLMs4SDoH’s past year of commit activity
    Python 1 0 0 0 Updated Jun 8, 2025
  • BIDS-Xu-Lab/kiwi_api_client’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated May 22, 2025
  • Biomedical-NLP-Benchmarks Public

    Benchmark Datasets for BioNLP Tasks

    BIDS-Xu-Lab/Biomedical-NLP-Benchmarks’s past year of commit activity
    Python 13 Apache-2.0 1 0 0 Updated May 7, 2025

Most used topics

Loading…