Added pause after insturment shutdowns. Yok ocrashed otherwise #112
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| name: Python Package using Conda | |
| on: [push] | |
| jobs: | |
| build-linux: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| max-parallel: 5 | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Set up Python 3.8 | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: 3.8 | |
| - name: Add conda to system path | |
| run: | | |
| # $CONDA is an environment variable pointing to the root of the miniconda directory | |
| echo $CONDA/bin >> $GITHUB_PATH | |
| echo "Pip is at $(which pip)" | |
| echo $CONDA | |
| echo $GITHUB_PATH | |
| - name: pip cache | |
| uses: actions/cache@v4 | |
| id: cache | |
| with: | |
| path: /usr/share/miniconda/lib/python3.8/site-packages/* | |
| key: ${{ runner.os }}-condapip-${{ secrets.CACHE_VERSION }}-${{ hashFiles('requirements.txt') }} | |
| restore-keys: | | |
| ${{ runner.os }}-condapip- | |
| ${{ runner.os }} | |
| - name: Install conda dependencies | |
| if: steps.cache.outputs.cache-hit != 'true' | |
| run: | | |
| echo "Cache miss. Installing dependencies" | |
| conda install -yq pip numpy scipy h5py sphinx matplotlib pandas networkx cffi jupyter psutil sqlalchemy ipykernel ipywidgets | |
| - name: Install pip dependencies | |
| if: steps.cache.outputs.cache-hit != 'true' | |
| run: | | |
| echo "Cache miss. Installing dependencies" | |
| echo "Pip is at $(which pip)" | |
| echo "Env python location: ${{ env.pythonLocation}}" | |
| pip install recommonmark sphinx-rtd-theme nbsphinx mkdocs markdown commonmark | |
| - name: Install BBN dependencies | |
| run: | | |
| sudo apt-get install pandoc | |
| export GIT_LFS_SKIP_SMUDGE=1 | |
| pip install git+https://github.com/BBN-Q/bbndb.git | |
| pip install git+https://github.com/BBN-Q/QGL.git@develop | |
| pip install git+https://github.com/spatialaudio/nbsphinx.git@master | |
| pip install pyvisa coveralls scikit-learn pyusb future python-usbtmc setproctitle progress serial pandoc | |
| export GIT_LFS_SKIP_SMUDGE=0 | |
| - name: Test with unittest | |
| run: | | |
| pip install -e . | |
| python -m unittest discover -v test | |
| - name: Build Documentation | |
| run: | | |
| cd doc | |
| make html | |
| cd .. | |
| - name: Commit documentation changes | |
| run: | | |
| echo "Cloning from $GITHUB_SERVER_URL/$GITHUB_REPOSITORY.git" | |
| git clone $GITHUB_SERVER_URL/$GITHUB_REPOSITORY.git --branch gh-pages --single-branch gh-pages | |
| cp -r doc/_build/html/* gh-pages/ | |
| cp -r doc/_build/html auspex_documentation | |
| cd gh-pages | |
| git config --local user.email "[email protected]" | |
| git config --local user.name "GitHub Action" | |
| git add . | |
| git commit -m "Update documentation" -a || true | |
| # The above command will fail if no changes were present, so we ignore | |
| # the return code. | |
| - name: Push changes | |
| uses: ad-m/github-push-action@master | |
| with: | |
| branch: gh-pages | |
| directory: gh-pages | |
| github_token: ${{ secrets.GITHUB_TOKEN }} | |
| - name: Auspex Documentation | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| path: auspex_documentation |