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{ | ||
"@context": "https://w3id.org/codemeta/3.0", | ||
"type": "SoftwareSourceCode", | ||
"applicationCategory": "Neuroscience", | ||
"codeRepository": "https://github.com/Aswendt-Lab/AIDAmri", | ||
"contributor": [ | ||
{ | ||
"id": "_:contributor_1", | ||
"type": "Person", | ||
"affiliation": { | ||
"type": "Organization", | ||
"name": "Department of Neurology, Faculty of Medicine and University Hospital Cologne, University of Cologne, Cologne, Germany" | ||
}, | ||
"email": "[email protected]", | ||
"familyName": "Pallast", | ||
"givenName": "Niklas" | ||
}, | ||
{ | ||
"type": "Role", | ||
"contributor": "_:contributor_1", | ||
"endDate": "2020-03-12", | ||
"roleName": "Developer", | ||
"startDate": "2017-08-10" | ||
}, | ||
{ | ||
"id": "_:contributor_2", | ||
"type": "Person", | ||
"affiliation": { | ||
"type": "Organization", | ||
"name": "Department of Neurology, Faculty of Medicine and University Hospital Cologne, University of Cologne, Cologne, Germany" | ||
}, | ||
"email": "[email protected]", | ||
"familyName": "Scharwächter", | ||
"givenName": "Leon" | ||
}, | ||
{ | ||
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"contributor": "_:contributor_2", | ||
"endDate": "2021-08-31", | ||
"roleName": "Developer", | ||
"startDate": "2020-04-01" | ||
}, | ||
{ | ||
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"type": "Person", | ||
"affiliation": { | ||
"type": "Organization", | ||
"name": "Department of Neurology, Faculty of Medicine and University Hospital Cologne, University of Cologne, Cologne, Germany" | ||
}, | ||
"email": "[email protected]", | ||
"familyName": "Vera Frazao", | ||
"givenName": "Victor" | ||
}, | ||
{ | ||
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"endDate": "2024-06-25", | ||
"roleName": "Developer", | ||
"startDate": "2021-09-07" | ||
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"type": "Person", | ||
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"name": "Department of Neurology, Faculty of Medicine and University Hospital Cologne, University of Cologne, Cologne, Germany" | ||
}, | ||
"email": "[email protected]", | ||
"familyName": "Schneider", | ||
"givenName": "Marc" | ||
}, | ||
{ | ||
"type": "Role", | ||
"contributor": "_:contributor_4", | ||
"endDate": "2024-03-27", | ||
"roleName": "Developer", | ||
"startDate": "2023-10-19" | ||
}, | ||
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"type": "Person", | ||
"affiliation": { | ||
"type": "Organization", | ||
"name": "Department of Neurology, Faculty of Medicine and University Hospital Cologne, University of Cologne, Cologne, Germany" | ||
}, | ||
"email": "[email protected]", | ||
"familyName": "Kalantari", | ||
"givenName": "Aref" | ||
}, | ||
{ | ||
"type": "Role", | ||
"contributor": "_:contributor_5", | ||
"endDate": "2024-08-27", | ||
"roleName": "Developer", | ||
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"type": "Person", | ||
"affiliation": { | ||
"type": "Organization", | ||
"name": "Department of Neurology, Faculty of Medicine and University Hospital Cologne, University of Cologne, Cologne, Germany" | ||
}, | ||
"email": "[email protected]", | ||
"familyName": "Aswendt", | ||
"givenName": "Markus" | ||
}, | ||
{ | ||
"type": "Role", | ||
"contributor": "_:contributor_6", | ||
"endDate": "2024-08-27", | ||
"roleName": "Developer", | ||
"startDate": "2018-11-29" | ||
} | ||
], | ||
"dateCreated": "2017-08-10", | ||
"dateModified": "2024-01-22", | ||
"datePublished": "2018-10-19", | ||
"description": "Dockerized Atlas-based Imaging Data Analysis Pipeline (AIDA) for structural and functional MRI of the mouse brain. Accepts Bruker raw data, BIDS and Nifty files as input. Performs a range of data conversion and pre-processing steps including the multi-step registration with the Allen Mouse Brain Atlas. ", | ||
"downloadUrl": "https://github.com/Aswendt-Lab/AIDAmri/releases/tag/v2.0", | ||
"funder": { | ||
"type": "Organization", | ||
"name": "Friebe Foundation" | ||
}, | ||
"keywords": [ | ||
"MRI", | ||
"mouse brain", | ||
"atlas registration", | ||
"rs-fMRI", | ||
"DTI", | ||
"connectivity" | ||
], | ||
"license": "https://spdx.org/licenses/GPL-3.0", | ||
"name": "AIDAmri", | ||
"operatingSystem": "OS-independent Docker", | ||
"programmingLanguage": "Python 3.7", | ||
"releaseNotes": "Introducing the Brain Imaging Data Structure (BIDS) to improve and standardize data organisation\nImproved batch processing, including independent T2 mapping\nParallel computing for faster processing\nCleaner processing output stream and verbose logging", | ||
"softwareRequirements": "Docker", | ||
"version": "2.0", | ||
"developmentStatus": "active", | ||
"funding": "T0498/28960/16", | ||
"referencePublication": "ttps://doi.org/10.3389/fninf.2019.00042" | ||
} |